A calculation procedure for X-ray total scattering and the pair distribution function from a crystalline structural model is presented. It allows one to easily and precisely deal with diffraction-angle-dependent parameters such as the atomic form factor and the resolution of the optics.

A detailed study on chiral compound structures found in the Cambridge Structural Database (CSD) is presented. Solvates, salts and co-crystals have intentionally been excluded, in order to focus on the most basic structures of single enantiomers, scalemates and racemates. Similarity between the latter and structures of achiral monomolecular compounds has been established and utilized to arrive at important conclusions about crystallization of chiral compounds. For example, the fundamental phenomenon of conglomerate formation and, in particular, their frequency of occurrence is addressed. In addition, rarely occurring kryptoracemates and scalemic compounds (anomalous racemates) are discussed. Finally, an extended search of enantiomer solid solutions in the CSD is performed to show that there are up to 1800 instances most probably hiding among the deposited crystal structures, while only a couple of dozen have been previously known and studied.

A study on chiral monomolecular compound structures found in the Cambridge Structural Database is presented.

The crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum is reported. It has high structural similarity to other gluconate 5-dehydrogenase proteins, demonstrating that this enzyme is highly conserved.

Described here are instructions for building and using an inexpensive automated microscope (AMi) that has been specifically designed for viewing and imaging the contents of multi-well plates. The X, Y, Z translation stage is controlled through dedicated software (AMiGUI) that is being made freely available. Movements are controlled by an Arduino-based board running grbl, and the graphical user interface and image acquisition are controlled via a Raspberry Pi microcomputer running Python. Images can be written to the Raspberry Pi or to a remote disk. Plates with multiple sample wells at each row/column position are supported, and a script file for automated z-stack depth-of-field enhancement is written along with the images. The graphical user interface and real-time imaging also make it easy to manually inspect and capture images of individual samples.

The true identity of the protein found in the crystals reported by Bondoc et al. [(2019), Acta Cryst. F75, 646–651] is given.

Mycobacterium tuberculosis produces glycogen (also known as α-glucan) to help evade human immunity. This pathogen uses the GlgE pathway to generate glycogen rather than the more well known glycogen synthase GlgA pathway, which is absent in this bacterium. Thus, the building block for this glucose polymer is α-maltose-1-phosphate rather than an NDP-glucose donor. One of the routes to α-maltose-1-phosphate is now known to involve the GlgA homologue GlgM, which uses ADP-glucose as a donor and α-glucose-1-phosphate as an acceptor. To help compare GlgA (a GT5 family member) with GlgM enzymes (GT4 family members), the X-ray crystal structure of GlgM from Mycobacterium smegmatis was solved to 1.9 Å resolution. While the enzymes shared a GT-B fold and several residues responsible for binding the donor substrate, they differed in some secondary-structural details, particularly in the N-terminal domain, which would be expected to be largely responsible for their different acceptor-substrate specificities.

For those who think that global warming is a 21st-century phenomenon, Scott Wing, a scientist at the Smithsonian’s National Museum of Natural History, has news about the past.

The post Fossils Show Prehistoric Global Warming appeared first on Smithsonian Insider.

It was an exciting and busy 24 hours at the National Zoo’s Conservation and Research Center in Front Royal, Va., last week as three births took place just hours apart. On the evening of July 9, a clouded leopard cub was born, followed by a Przewalski’s horse foal and a red panda cub.

The post Baby Boom of Endangered Species at Smithsonian’s National Zoo’s Conservation and Research Center appeared first on Smithsonian Insider.

While studying bats recently at the Academy of Natural Sciences in Philadelphia, Smithsonian mammalogist Kristofer Helgen discovered a new species of flying fox bat from […]

The post Smithsonian Scientist Discovers Two New Bat Species Hiding in Museum Collections for More Than 150 Years appeared first on Smithsonian Insider.

Already under siege from overfishing, disease and poor water quality, the oyster population in the Chesapeake Bay today stands at 2 percent of what it was in colonial times. Now, new data show that rising acidity in the Bay will have a negative impact on oyster shells.

The post Rising acidification of estuary waters spells trouble for Chesapeake Bay oysters appeared first on Smithsonian Insider.

New observations by the Smithsonian’s Submillimeter Array, a radio telescope atop Mauna Kea in Hawaii, are shedding light on planet formation. The array provides sharp views by combining eight antennas into the equivalent of a single, large telescope. It can resolve details as small as a dime seen from seven miles away.

The post Cosmic “baby photos” of distant solar systems lend insight as to how planets form appeared first on Smithsonian Insider.

A recent survey of the bottom-dwelling animals of the Chesapeake has revealed that communities of even these relatively hardy organisms are under stress. Many regions of the bay are becoming inhospitable to bottom-dwelling animals because of a lack of oxygen—a condition known as “hypoxia.”

The post Bottom-dwelling creatures in the Chesapeake Bay need more oxygen, study finds. appeared first on Smithsonian Insider.

The National Zoo has been awarded a grant from the U.S. Fish and Wildlife Service to establish a captive population of the Virginia big-eared bat at the National Zoo’s Conservation & Research Center near Front Royal, Va. Only 15,000 Virginia big-eared bats remain living in caves in West Virginia, Virginia, Kentucky and North Carolina, and these are threatened by the white-nose syndrome.

The post In face of crisis, National Zoo to start captive population of Virginia big-eared bats appeared first on Smithsonian Insider.

It is one of the largest and most productive estuaries in the world, yet dramatic changes are in store for the Chesapeake Bay in coming […]

The post Climate change may drastically alter Chesapeake Bay, scientists say appeared first on Smithsonian Insider.

Koenig and his colleagues examined an area of space called W5, which lies about 6,500 light-years away toward the constellation Cassiopeia—about 6 trillion miles. Their research indicates the prospects for hypothetical alien life there are disappointing.

The post Planets form around many star types, but intelligent life is probably rare appeared first on Smithsonian Insider.

It’s not an exaggeration to say Hedrick was ecstatic when she peered into her inverted phase contrast microscope and found "Amphisolenia quadrispina" floating in her sample. “For 20 years I’ve been hoping to see something like this,” she says.

The post From the Bay of Bengal, a dinoflagellate makes its way to the Smithsonian appeared first on Smithsonian Insider.

Eleven bats remain in the National Zoo’s colony. The initial challenge the team faced was how to feed the animals. Virginia big-eared bats, which are a subspecies of the Townsend’s big-eared bat (Corynorhinuss townsendii), eat while flying.

The post Captive colony of Virginia big-eared bats providing valuable lessons in battle against deadly white-nose syndrome appeared first on Smithsonian Insider.

The Stephen L. Wood collection brings the collection of bark beetles held in the Natural History Museum’s Department of Entomology to an impressive 180,000 specimens, making it one of the most extensive collections in world.

The post Eighty-thousand bark beetles enter National Museum of Natural History collections appeared first on Smithsonian Insider.

Long before dawn on a recent morning, Katie Milton and a group of stalwart volunteers, each armed with flashlight and compass, spread out into the jungle to take up positions at 35 listening stations marked on maps of the island.

The post Census reveals 1,200 howler monkeys living on Barro Colorado Island appeared first on Smithsonian Insider.

More than 25 years ago, researchers at the Smithsonian Environmental Research Center's Fish and Invertebrate Ecology Lab began taking weekley surveys of the species that make their way in and out of Muddy Creek.

The post Net survey: For quarter century, scientists have been counting creatures traveling Chesapeake Bay tributary appeared first on Smithsonian Insider.

The new study suggests that echolocation calls also serve a social function--bats listen to the ultrasonic calls of other bats to identify roost mates, bats of the same species, members of the opposite sex and intruders to their territory.

The post Scientists find ultrasonic calls of bats also serve a social function appeared first on Smithsonian Insider.

Kiwis come to National Zoo. The Smithsonian’s National Zoo will be using a new kiwi pair donated by the New Zealand Embassy to establish a breeding science center. […]

The post New Zealand Embassy donates kiwi pair to National Zoo Breeding Science Center appeared first on Smithsonian Insider.

Breitburg and her team want to determine just how much stress they cause. Over the next five years they will conduct a series of lab and field experiments that examine how diel-cycling hypoxia and the associated acidification affects the growth and disease rates in striped bass, the eastern oyster and other ecologically and economically important Chesapeake Bay species. They will also study the animals’ behavioral responses to these changes.

The post Smithsonian ecologists to examine “dead zones” in Chesapeake Bay with $1.4 million NOAA grant appeared first on Smithsonian Insider.

Should global warming cause sea levels to rise as predicted in coming decades, thousands of archaeological sites in coastal areas around the world will be lost to erosion. With no hope of saving all of these sites, three archaeologists—Leslie Reeder of Southern Methodist University, Jon Erlandson of the University of Oregon and Torben Rick from the Smithsonian's National Museum of Natural History—have issued a call to action for scientists to assess the sites most at risk around the world.

The post Scientists issue call to action for archaeological sites threatened by rising seas, urban development appeared first on Smithsonian Insider.

A roundup of recent articles featuring spiders, bats and rats....

The post A Halloween roundup featuring recent articles on spiders, bats and rats appeared first on Smithsonian Insider.

To celebrate a cool Halloween creature--bats--we teamed up with the Smithsonian’s Kristofer Helgen, curator of mammals at the National Museum of Natural History. Here, he answers three commonly asked questions about these winged mammals.

The post Smithsonian bat expert Kristofer Helgen answers common questions about bats appeared first on Smithsonian Insider.

A diminutive bat with cinnamon-brown coloring collected in 1979 in Ecuador by mammalogist Don Wilson of the Smithsonian’s National Museum of Natural History represents a new species a recent paper in the journal “Mammalian Biology” has revealed.

The post New species of bat named from central coastal Ecuador appeared first on Smithsonian Insider.

On the Smithsonian Tropical Research Institute's Barro Colorado Island in the Panama Canal, staff members are taking down a network of seven tall Automated Radio Telemetry System towers used to track animals wearing radio-transmitters. Scientists on the island are switching to GPS and camera trap systems to produce more data with less infrastructure.

The post GPS and camera traps to replace radio antennas in tracking animals on Barro Colorado Island appeared first on Smithsonian Insider.

Despite the general perception of exurban development as environmentally preferable to urban sprawl, this is not necessarily correct. Housing development is detrimental for natural bird communities even at low housing levels.

The post Exurban development is changing communities of birds in Eastern Forests appeared first on Smithsonian Insider.

A research team from The Smithsonian Environmental Research Center and Virginia's Old Dominion University will be awarded $110,999 to develop a tool to help seagrass restorers predict which places will be the best for planting seagrasses, the Virginia Sea Grant has announced.

The post Environmental Research Center to help with Chesapeake Bay seagrass restoration appeared first on Smithsonian Insider.

Twenty years ago scientists at the Marine Invasions Lab of the Smithsonian Environmental Research Center in Edgewater, Md., began studying the interactions between native grass […]

The post Invasive oriental shrimp found in Chesapeake Bay by Smithsonian scientists appeared first on Smithsonian Insider.

A new telescope has begun to virtually explore the solar system outback, and already is scoring discoveries.

The post New telescope exploring Solar System’s “outback” appeared first on Smithsonian Insider.

Bats living in the dense urban area of Panama City, the scientists learned, represent just a small fraction of the roughly 25 species of high-flying insectivorous bats found in Panama’s rainforests.

The post Only large, fast-flying bats can handle life in the big city; small bats can’t adapt appeared first on Smithsonian Insider.


They found that the molars of fruit-eating species had sharp outer edges that likely allow them to pierce tough fruit skin and pulp... By contrast, the molars of insect-eating species were less complex, possibly because of their smoother shearing surfaces.

The post From chewing tough insects to soft fruit, bat teeth are highly specialized appeared first on Smithsonian Insider.

Recent work has added dozens of new measurements to star-forming regions in the Milky Way. These measurements have changed the map of the Milky Way, indicating our galaxy has four spiral arms, not two, as previously thought.

The post Very Large Baseline Array telescope is helping Smithsonian astronomers remap Milky Way and Andromeda galaxies appeared first on Smithsonian Insider.

Smithsonian scientists report fledgling catbirds in suburban habitats are at their most vulnerable stage of life, with almost 80 percent killed by predators before they reach adulthood. Almost half of the deaths were connected to domestic cats.

The post Alarming number of fledgling, suburban catbirds fall prey to domestic cats, study finds appeared first on Smithsonian Insider.

The words “box jelly” may bring to mind something sweet and tasty, but the banded box jelly of Bonaire is a highly venomous jellyfish with […]

The post “Ohboya!” It’s the Bonaire banded box jellyfish, a new species appeared first on Smithsonian Insider.

A new bacterial genome sequence could help researchers solve a mystery as to how microorganisms produce a highly toxic form of mercury.

The post New bacteria genome may help solve mystery of how methylmercury is made appeared first on Smithsonian Insider.

Astronomers of the future won't have to take the Big Bang on faith. With careful measurements and clever analysis, they can find the subtle evidence outlining the history of the universe.

The post Astronomers in distant future might still deduce the Big Bang origin of the Universe appeared first on Smithsonian Insider.

Researchers at the Smithsonian Conservation Biology Institute and partnering organizations will build a frozen repository of Great Barrier Reef coral sperm and embryonic cells. Genetic banks composed of frozen biomaterials hold strong promise for basic and applied research and conservation of species and genetic variation.

The post Smithsonian Conservation Biology Institute to help create frozen repository of sperm and embryonic cells for Great Barrier Reef corals appeared first on Smithsonian Insider.

A new genetic study by a team of Cuban and American researchers confirms that American crocodiles are hybridizing with wild populations of critically endangered Cuban crocodiles, which may cause a population decline of this species found only in the Cuban Archipelago.

The post Genetic study confirms American crocodiles and critically endangered Cuban crocodiles are hybridizing in the wild appeared first on Smithsonian Insider.

Now, a new study of hellbenders by scientists at the Smithsonian Conservation Biology Institute will place these amphibians at the center of the conservation of Appalachian salamanders.

The post Will global warming be hell on the hellbender? Smithsonian study aims to find out. appeared first on Smithsonian Insider.

Ecologists at the Smithsonian Environmental Research Center measure the growth rate of sedge grass in a brackish Chesapeake Bay marsh. Fed a diet rich in […]

The post SERC sedge grass experiment mimics predicted global-change scenario appeared first on Smithsonian Insider.

Alaska’s pristine coastline is ripe for an influx of invasive marine species such as the European green crab and the rough periwinkle (an Atlantic sea snail) warns a new study by a team of scientists from the Smithsonian Environmental Research Center.

The post Alaska’s cold waters no barrier to invasive marine species, scientists say appeared first on Smithsonian Insider.

What Google is attempting for books, the University of California, Berkeley, plans to do for the world's vertebrate specimens: store them in "the cloud."

The post New “cloud-based” storage initiative to make vertebrate research collections available worldwide appeared first on Smithsonian Insider.

Two scientists at the Smithsonian Institution have been honored with the Presidential Early Career Award for Scientists and Engineers for their innovative research and scientific leadership. It is the highest honor bestowed by the U.S. government on science and engineering professionals in the early stages of their independent research careers.

The post President Barack Obama recognizes outstanding scientists at the Smithsonian appeared first on Smithsonian Insider.

A new study by a team of scientists from the Smithsonian’s National Museum of Natural History, the National University of Singapore and the Slovenian Academy of Sciences and Arts have unlocked the secret to mate binding in orb web spiders, and revealed just how it calms the cannibalistic female spider.

The post Suitor’s gentle massage soothes aggressive, cannibalistic female spiders, researchers find appeared first on Smithsonian Insider.

For the first time, researchers from the Smithsonian Conservation Biology Institute’s Migratory Bird Center analyzed how songbirds are affected by both general noise and the acoustics of hard human-made surfaces in urban areas.

The post Urban songbirds adjust melodies to adapt to life in the big city, Smithsonian scientists find appeared first on Smithsonian Insider.

Researchers from the Smithsonian Conservation Biology Institute, Hawaii Institute of Marine Biology and other partnering organizations spent two weeks at the end of November collecting sperm and embryonic cells during spawning from two species of coral and have built the first frozen repository for the Great Barrier Reef.

The post Smithsonian scientists help build first frozen repository of Great Barrier Reef coral appeared first on Smithsonian Insider.