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Picture of the Bibliographical Information of the Planet to the XXI Century by A.V. Kumanova: Book Review




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CLEAR & RETURN: Stopping Run-Time Countermeasures in Cryptographic Primitives

Myung-Hyun KIM,Seungkwang LEE, Vol.E107-D, No.11, pp.1449-1452
White-box cryptographic implementations often use masking and shuffling as countermeasures against key extraction attacks. To counter these defenses, higher-order Differential Computation Analysis (HO-DCA) and its variants have been developed. These methods aim to breach these countermeasures without needing reverse engineering. However, these non-invasive attacks are expensive and can be thwarted by updating the masking and shuffling techniques. This paper introduces a simple binary injection attack, aptly named clear & return, designed to bypass advanced masking and shuffling defenses employed in white-box cryptography. The attack involves injecting a small amount of assembly code, which effectively disables run-time random sources. This loss of randomness exposes the unprotected lookup value within white-box implementations, making them vulnerable to simple statistical analysis. In experiments targeting open-source white-box cryptographic implementations, the attack strategy of hijacking entries in the Global Offset Table (GOT) or function calls shows effectiveness in circumventing run-time countermeasures.
Publication Date: 2024/11/01




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Intel Arc Graphics Driver for Windows 11 & 10 - 32.0.101.6297

Intel Arc Graphics Driver for Windows is a driver specifically for Windows 10 and 11 with support for the 12th Gen Intel Core processor family and Intel Arc A-Series Graphics.... [License: Freeware | Requires: 11|10 | Size: 1 GB ]




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A multiregion community model for inference about geographic variation in species richness




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EMODnet Workshop on mechanisms and guidelines to mobilise historical data into biogeographic databases




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Potential exploitation of avian resources by fossil hominids: an overview from ethnographic and historical data




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Demographic trend could trigger rise in same-level falls: study

Melbourne, Australia — An expected increase in 45-and-older women in the workforce could mean more on-the-job falls to the same level, a recent study out of Monash University suggests.




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2016 State of Safety: Changing demographics

Older workers have a wealth of knowledge from their years of experience. But they also bring increased risk of on-the-job fatalities and severe injuries. In about six years, one-quarter of all U.S. workers will be 55 or older. What actions can safety professionals take now to ensure a safe workplace down the road? “This is the next frontier,” one safety pro says.




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Graphic image of workplace fatalities

As a writer I’m loath to admit it, but sometimes words just can’t paint as clear of a picture as, well, a picture.




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Infographic: Alcohol-impaired holiday traffic fatalities

An infographic presents statistics on motor vehicle deaths involving alcohol impairment during holiday periods.




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Infographic: ‘Hands-free is not risk-free’

A recent National Safety Council poll found 80 percent of drivers believe hands-free cell phones are safer than handheld phones.




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Infographic: Helping workers adapt to hot environments

Heat stress can be deadly, and employers need to protect their employees from the dangers of hot environments. Here’s one tool to give you a better picture on how to do just that.




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Infographic: A lifetime of risk

View or share a National Safety Month infographic summarizing the biggest risks at each stage of a person's life.




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Infographic: Guide to the New ANSI Cut Levels

In this infographic, Magid Glove explains new changes to the ANSI/ISEA 105-2016 cut protection standard: How to read the new cut level icon and how to choose the right cut level for the job.




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American Chemistry Council creates PPE infographic for auto refinishers

Washington — In partnership with OSHA, the American Chemistry Council has published an infographic to encourage workers in the automotive refinishing industry to wear the correct personal protective equipment.




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Electrical safety group unveils videos, infographics for workers in non-electrical jobs

Arlington, VA — The Electrical Safety Foundation International has introduced several resources aimed at workers in “occupations that traditionally receive little to no electrical training.”




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Electrical safety group creates infographic for people working from home

Arlington, VA — Aiming to promote electrical safety among people who are working from home during the COVID-19 pandemic, the Electrical Safety Foundation International has published an infographic.




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OSHA and MSHA partner on poster and infographic on preventing heat illness

Washington — A new poster and infographic from OSHA and the Mine Safety and Health Administration offer best practices to help mine operators and workers mitigate heat-related hazards and prevent heat illness.




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Children living in pandemic times: a geographical, transnational and situated view.

Children's Geographies; 08/01/2022
(AN 158427725); ISSN: 14733285
Academic Search Premier





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From who ... to where? A geographical approach to peer-on-peer sexual abuse.

Children's Geographies; 10/01/2022
(AN 159948767); ISSN: 14733285
Academic Search Premier




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Children's physical activity and active travel: a cross-sectional study of activity spaces, sociodemographic and neighborhood associations.

Children's Geographies; 04/01/2023
(AN 163915532); ISSN: 14733285
Academic Search Premier




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Identity, belonging and place attachment amongst Pacific Island children: a photographic analysis.

Children's Geographies; 04/01/2023
(AN 163915531); ISSN: 14733285
Academic Search Premier




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Navigating dis/ableist school playgrounds and toilets with geographic maturity: stories of young people with dwarfism from their secondary education.

Children's Geographies; 08/01/2023
(AN 167303406); ISSN: 14733285
Academic Search Premier




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Modelling geographic access and school catchment areas across public primary schools to support subnational planning in Kenya.

Children's Geographies; 10/01/2023
(AN 173035616); ISSN: 14733285
Academic Search Premier




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Picturing broader socioeconomic conditions: introducing demographic data to participatory photo mapping in order to help youth understand community stratification.

Children's Geographies; 08/01/2024
(AN 178911403); ISSN: 14733285
Academic Search Premier




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Toddlers' engagements with preschool playgrounds: ethnographic insights from Sweden.

Children's Geographies; 10/01/2024
(AN 180134757); ISSN: 14733285
Academic Search Premier




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From contested spaces to choice-centered places: using geographic interviews to understand young adults' experiences in permanent supportive housing.

Children's Geographies; 10/01/2024
(AN 180134747); ISSN: 14733285
Academic Search Premier






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The Bookshelf: New Sources and New Liberties in Volume II of Civil War Graphic Novel

Freeman Colby was a young schoolteacher from New Hampshire who joined the Union Army during the American Civil War. For the first nine months, Colby kept detailed notes of his service and wrote to his family members. Marek Bennett of Henniker drew on these rich resources for his graphic novel, The Civil War Diary of Freeman Colby. In that volume, Bennett stuck close to Colby's exact language. Recently, he's published Volume II, in which he takes some liberties and draws on new sources for inspiration. NHPR's Peter Biello sat down with Marek Bennett to talk about Volume II.




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The Bookshelf: Keene Author Recalls 'Cub' Reporting Days in Graphic Memoir

When Cindy Copeland was in seventh grade in the early 1970s, an English teacher encouraged her to become a writer. Shortly after that, the Keene resident landed an internship as a “cub reporter” with a local journalist, following her to public meetings and learning how question people powerful people—most of them men. And Cindy did all this while navigating the tricky minefield of fraught friendships, cliques, and bullying that so often characterize life in junior high.




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April National Geographic

The April National Geographic is definitely worth getting if you're interested in hominids. There's an article on the hobbits, Homo floresiensis, and another article about the Dmanisi hominids from Georgia; in particular, a new skull has been discovered there. The new skull is of interest because it is almost entirely toothless, suggesting that the individual must have received considerable support from his companions. This skull was also published on this month (Lordkipanidze et al. 2005, Nature, 434:717).





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From `crystallographic accuracy' to `thermodynamic accuracy': a redetermination of the crystal structure of calcium atorvastatin trihydrate (Lipitor®)

The crystal structure of calcium atorvastatin trihydrate was redetermined from previously published synchrotron powder diffraction data to give a much-improved agreement with two independent density-functional theory calculations.




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From `crystallographic accuracy' to `thermodynamic accuracy': a redetermination of the crystal structure of calcium atorvastatin trihydrate (Lipitor®)

With ever-improving quantum-mechanical computational methods, the accuracy requirements for experimental crystal structures increase. The crystal structure of calcium atorvastatin trihydrate, which has 56 degrees of freedom when determined with a real-space algorithm, was determined from powder diffraction data by Hodge et al. [Powder Diffr. (2020), 35, 136–143]. The crystal structure was a good fit to the experimental data, indicating that the electron density had been captured essentially correctly, but two independent quantum-mechanical calculations disagreed with the experimental structure and with each other. Using the same experimental data, the crystal structure was redetermined from scratch and it was shown that it can be reproduced within a root-mean-square Cartesian displacement of 0.1 Å by two independent quantum-mechanical calculations. The consequences for the calculated energies and solubilities are described.





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X-ray crystallographic structure of a novel enantiopure chiral isothiourea with potential applications in enantioselective synthesis

The synthesis of a chiral isothiourea, namely, (4aR,8aR)-3-phenyl-4a,5,6,7,8,8a-hexahydrobenzo[4,5]imidazo[2,1-b]thiazol-9-ium bromide, C15H17N2S+·Br−, with potential organocatalytic and anti-inflammatory activity is reported. The preparation of the heterocycle of interest was carried out in two high-yielding steps. The hydrobromide salt of the isothiourea of interest provided suitable crystals for X-ray diffraction analysis, the results of which are reported. Salient observations from this analysis are the near perpendicular arrangement of the phenyl ring and the mean plane of the heterocycle. This conformational characteristic may be relevant with regard the stereoselectivity induced by the chiral isothiourea in asymmetric reactions. Furthermore, evidence was found for the existence of an S...Br− halogen bond.





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Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis

Crystallographic fragment screening has become a pivotal technique in structure-based drug design, particularly for bacterial targets with a crucial role in infectious disease mechanisms. The enzyme CdaA, which synthesizes an essential second messenger cyclic di-AMP (c-di-AMP) in many pathogenic bacteria, has emerged as a promising candidate for the development of novel antibiotics. To identify crystals suitable for fragment screening, CdaA enzymes from Streptococcus pneumoniae, Bacillus subtilis and Enterococcus faecium were purified and crystallized. Crystals of B. subtilis CdaA, which diffracted to the highest resolution of 1.1 Å, were used to perform the screening of 96 fragments, yielding data sets with resolutions spanning from 1.08 to 1.87 Å. A total of 24 structural hits across eight different sites were identified. Four fragments bind to regions that are highly conserved among pathogenic bacteria, specifically the active site (three fragments) and the dimerization interface (one fragment). The coordinates of the three active-site fragments were used to perform an in silico drug-repurposing screen using the OpenEye suite and the DrugBank database. This screen identified tenofovir, an approved drug, that is predicted to interact with the ATP-binding region of CdaA. Its inhibitory potential against pathogenic E. faecium CdaA has been confirmed by ITC measurements. These findings not only demonstrate the feasibility of this approach for identifying lead compounds for the design of novel antibacterial agents, but also pave the way for further fragment-based lead-optimization efforts targeting CdaA.







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First X-ray spectral ptychography and resonant ptychographic computed tomography experiments at the SWING beamline from Synchrotron SOLEIL

X-ray ptychography and ptychographic computed tomography have seen a rapid rise since the advent of fourth-generation synchrotrons with a high degree of coherent radiation. In addition to quantitative multiscale structural analysis, ptychography with spectral capabilities has been developed, allowing for spatial-localized multiscale structural and spectral information of samples. The SWING beamline of Synchrotron SOLEIL has recently developed a nanoprobe setup where the endstation's first spectral and resonant ptychographic measurements have been successfully conducted. A metallic nickel wire sample was measured using 2D spectral ptychography in XANES mode and resonant ptychographic tomography. From the 2D spectral ptychography measurements, the spectra of the components of the sample's complex-valued refractive index, δ and β, were extracted, integrated along the sample thickness. By performing resonance ptychographic tomography at two photon energies, 3D maps of the refractive index decrement, δ, were obtained at the Ni K-edge energy and another energy above the edge. These maps allowed the detection of impurities in the Ni wire. The significance of accounting for the atomic scattering factor is demonstrated in the calculation of electron density near a resonance through the use of the δ values. These results indicate that at the SWING beamline it is possible to conduct state-of-the-art spectral and resonant ptychography experiments using the nanoprobe setup.




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Synthesis, spectroscopic and crystallographic characterization of various cymantrenyl thio­ethers [Mn{C5HxBry(SMe)z}(PPh3)(CO)2]

Starting from [Mn(C5H4Br)(PPh3)(CO)2] (1a), the cymantrenyl thio­ethers [Mn(C5H4SMe)(PPh3)(CO)2] (1b) and [Mn{C5H4–nBr(SMe)n}(PPh3)(CO)2] (n = 1 for com­pound 2, n = 2 for 3 and n = 3 for 4) were obtained, using either n-butyllithium (n-BuLi), lithium diiso­propyl­amide (LDA) or lithium tetra­methyl­piperidide (LiTMP) as base, followed by electrophilic quenching with MeSSMe. Stepwise consecutive reaction of [Mn(C5Br5)(PPh3)(CO)2] with n-BuLi and MeSSMe led finally to [Mn{C5(SMe)5}(PPh3)(CO)2] (11), only the fifth com­plex to be reported containing a perthiol­ated cyclo­penta­dienyl ring. The mol­ecular and crystal structures of 1b, 3, 4 and 11 were determined and were studied for the occurrence of S⋯S and S⋯Br inter­actions. It turned out that although some inter­actions of this type occurred, they were of minor importance for the arrangement of the mol­ecules in the crystal.




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2,4-Di­aryl­pyrroles: synthesis, characterization and crystallographic insights

Three 2,4-di­aryl­pyrroles were synthesized starting from 4-nitro­butano­nes and the crystal structures of two derivatives were analysed. These are 4-(4-meth­oxy­phen­yl)-2-(thio­phen-2-yl)-1H-pyrrole, C15H13NOS, and 3-(4-bromo­phen­yl)-2-nitroso-5-phenyl-1H-pyrrole, C16H11BrN2O. Although pyrroles without sub­stituents at the α-position with respect to the N atom are very air sensitive and tend to polymerize, we succeeded in growing an adequate crystal for X-ray diffraction analysis. Further derivatization using sodium nitrite afforded a nitrosyl pyrrole derivative, which crystallized in the triclinic space group Poverline{1} with Z = 6. Thus, herein we report the first crystal structure of a nitrosyl pyrrole. Inter­estingly, the co-operative hydrogen bonds in this NO-substituted pyrrole lead to a trimeric structure with bifurcated halogen bonds at the ends, forming a two-dimensional (2D) layer with inter­stitial voids having a radius of 5 Å, similar to some reported macrocyclic porphyrins.




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Deep-learning map segmentation for protein X-ray crystallographic structure determination

When solving a structure of a protein from single-wavelength anomalous diffraction X-ray data, the initial phases obtained by phasing from an anomalously scattering substructure usually need to be improved by an iterated electron-density modification. In this manuscript, the use of convolutional neural networks (CNNs) for segmentation of the initial experimental phasing electron-density maps is proposed. The results reported demonstrate that a CNN with U-net architecture, trained on several thousands of electron-density maps generated mainly using X-ray data from the Protein Data Bank in a supervised learning, can improve current density-modification methods.




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Managing macromolecular crystallographic data with a laboratory information management system

Protein crystallography is an established method to study the atomic structures of macromolecules and their complexes. A prerequisite for successful structure determination is diffraction-quality crystals, which may require extensive optimization of both the protein and the conditions, and hence projects can stretch over an extended period, with multiple users being involved. The workflow from crystallization and crystal treatment to deposition and publication is well defined, and therefore an electronic laboratory information management system (LIMS) is well suited to management of the data. Completion of the project requires key information on all the steps being available and this information should also be made available according to the FAIR principles. As crystallized samples are typically shipped between facilities, a key feature to be captured in the LIMS is the exchange of metadata between the crystallization facility of the home laboratory and, for example, synchrotron facilities. On completion, structures are deposited in the Protein Data Bank (PDB) and the LIMS can include the PDB code in its database, completing the chain of custody from crystallization to structure deposition and publication. A LIMS designed for macromolecular crystallography, IceBear, is available as a standalone installation and as a hosted service, and the implementation of key features for the capture of metadata in IceBear is discussed as an example.




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Crystallographic fragment-binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate-channeling path between them

The Mycobacterium tuberculosis trifunctional enzyme (MtTFE) is an α2β2 tetrameric enzyme in which the α-chain harbors the 2E-enoyl-CoA hydratase (ECH) and 3S-hydroxyacyl-CoA dehydrogenase (HAD) active sites, and the β-chain provides the 3-ketoacyl-CoA thiolase (KAT) active site. Linear, medium-chain and long-chain 2E-enoyl-CoA molecules are the preferred substrates of MtTFE. Previous crystallographic binding and modeling studies identified binding sites for the acyl-CoA substrates at the three active sites, as well as the NAD binding pocket at the HAD active site. These studies also identified three additional CoA binding sites on the surface of MtTFE that are different from the active sites. It has been proposed that one of these additional sites could be of functional relevance for the substrate channeling (by surface crawling) of reaction intermediates between the three active sites. Here, 226 fragments were screened in a crystallographic fragment-binding study of MtTFE crystals, resulting in the structures of 16 MtTFE–fragment complexes. Analysis of the 121 fragment-binding events shows that the ECH active site is the `binding hotspot' for the tested fragments, with 41 binding events. The mode of binding of the fragments bound at the active sites provides additional insight into how the long-chain acyl moiety of the substrates can be accommodated at their proposed binding pockets. In addition, the 20 fragment-binding events between the active sites identify potential transient binding sites of reaction intermediates relevant to the possible channeling of substrates between these active sites. These results provide a basis for further studies to understand the functional relevance of the latter binding sites and to identify substrates for which channeling is crucial.




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Robust and automatic beamstop shadow outlier rejection: combining crystallographic statistics with modern clustering under a semi-supervised learning strategy

During the automatic processing of crystallographic diffraction experiments, beamstop shadows are often unaccounted for or only partially masked. As a result of this, outlier reflection intensities are integrated, which is a known issue. Traditional statistical diagnostics have only limited effectiveness in identifying these outliers, here termed Not-Excluded-unMasked-Outliers (NEMOs). The diagnostic tool AUSPEX allows visual inspection of NEMOs, where they form a typical pattern: clusters at the low-resolution end of the AUSPEX plots of intensities or amplitudes versus resolution. To automate NEMO detection, a new algorithm was developed by combining data statistics with a density-based clustering method. This approach demonstrates a promising performance in detecting NEMOs in merged data sets without disrupting existing data-reduction pipelines. Re-refinement results indicate that excluding the identified NEMOs can effectively enhance the quality of subsequent structure-determination steps. This method offers a prospective automated means to assess the efficacy of a beamstop mask, as well as highlighting the potential of modern pattern-recognition techniques for automating outlier exclusion during data processing, facilitating future adaptation to evolving experimental strategies.