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Prostate cancer patient stratification by molecular signatures in the Veterans Precision Oncology Data Commons [RESEARCH REPORT]

Veterans are at an increased risk for prostate cancer, a disease with extraordinary clinical and molecular heterogeneity, compared with the general population. However, little is known about the underlying molecular heterogeneity within the veteran population and its impact on patient management and treatment. Using clinical and targeted tumor sequencing data from the National Veterans Affairs health system, we conducted a retrospective cohort study on 45 patients with advanced prostate cancer in the Veterans Precision Oncology Data Commons (VPODC), most of whom were metastatic castration-resistant. We characterized the mutational burden in this cohort and conducted unsupervised clustering analysis to stratify patients by molecular alterations. Veterans with prostate cancer exhibited a mutational landscape broadly similar to prior studies, including KMT2A and NOTCH1 mutations associated with neuroendocrine prostate cancer phenotype, previously reported to be enriched in veterans. We also identified several potential novel mutations in PTEN, MSH6, VHL, SMO, and ABL1. Hierarchical clustering analysis revealed two subgroups containing therapeutically targetable molecular features with novel mutational signatures distinct from those reported in the Catalogue of Somatic Mutations in Cancer database. The clustering approach presented in this study can potentially be used to clinically stratify patients based on their distinct mutational profiles and identify actionable somatic mutations for precision oncology.




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Lack of Knowledge of Antibiotic Risks Contributes to Primary Care Patients Expectations of Antibiotics for Common Symptoms [Research Briefs]

Patient expectations of receiving antibiotics for common symptoms can trigger unnecessary use. We conducted a survey (n = 564) between January 2020 to June 2021 in public and private primary care clinics in Texas to study the prevalence and predictors of patients’ antibiotic expectations for common symptoms/illnesses. We surveyed Black patients (33%) and Hispanic/Latine patients (47%), and over 93% expected to receive an antibiotic for at least 1 of the 5 pre-defined symptoms/illnesses. Public clinic patients were nearly twice as likely to expect antibiotics for sore throat, diarrhea, and cold/flu than private clinic patients. Lack of knowledge of potential risks of antibiotic use was associated with increased antibiotic expectations for diarrhea (odds ratio [OR] = 1.6; 95% CI, 1.1-2.4) and cold/flu symptoms (OR = 2.9; 95% CI, 2.0-4.4). Lower education and inadequate health literacy were predictors of antibiotic expectations for diarrhea. Future antibiotic stewardship interventions should tailor patient education materials to include information on antibiotic risks and guidance on appropriate antibiotic indications.




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The Common Experience That Explains Trump's Gains

The most impressive aspect of Donald Trump's victory over Vice President Kamala Harris last week was the uniformity of his gains across the electoral landscape.




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Commonwealth Games hosts to have freedom to ditch traditional sports for new urban or e-sports



  • topics:organisations/uk-athletics
  • topics:things/swimming-recreational
  • topics:events/birmingham-commonwealth-games-2022
  • topics:events/commonwealth-games
  • structure:sport
  • storytype:standard

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Tom Daley invited for Commonwealth Games talks over LGBT rights concerns




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Laura Kenny leaves heartache behind to lead England to Commonwealth team pursuit bronze

  • Day 2 action at the Birmingham Commonwealth Games
  • Local boy Fraser stars as England retain gymnastics team title
  • England's Yee wins first gold of Games in men's triathlon
  • Cyclist Fachie equals Scottish record of five Commonwealth golds
  • Olympic champion Duffy wins women's triathlon
  • England's Taylor-Brown second, Scotland's Potter third
  • ]]>



    • topics:organisations/the-commonwealth
    • structure:sport
    • topics:events/birmingham-commonwealth-games-2022


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    Commonwealth Games 2022: Shock in the pool as Adam Peaty out of the medals in 100m breaststroke

  • Track cycling abandoned after riders and fans caught in huge crash
  • England's Jake Jarman takes gold in the men's all-round gymnastics final while James Hall takes silver
  • England's Ondine Achampong wins silver in women's all-around
  • Alice Tai wins gold in the pool just six months after having her leg amputated 
  • Shock as Peaty finishes out of the medals in the 100m breaststroke as James Wilby wins gold
  • ]]>




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    Adam Peaty accused of disrespecting Commonwealth Games after roaring into breaststroke final

    Adam Peaty roared back at those writing him off after cruising through his 50 metres breaststroke semi-final – but was later accused of being disrespectful towards Commonwealth Games competitors.

    ]]>




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    Contrite Adam Peaty fights back to win Commonwealth Games gold after ‘disrespect’ controversy

  • Adam Peaty is right about Commonwealths not being the pinnacle
  • Peaty accused of disrespecting Games after roaring into 50m final
  • British Cycling ‘confident’ they can replace Kenny if she retires
  • Englishman Jake Jarman wins fourth gymnastics gold medal
  • Daily Games schedule – plus key events to watch out for
  • ]]>



    • topics:events/commonwealth-games
    • structure:sport
    • topics:events/birmingham-commonwealth-games-2022
    • topics:people/adam-peaty

    common

    Commonwealth Games 2022: Geraint Thomas wins bronze but early crash costs him gold

  • Geraint Thomas wins bronze after crash proves costly in men's time trial
  • It is official - England is the world's heptathlon talent factory
  • Eilish McColgan follows mother's footsteps with thrilling gold medal run at Commonwealth Games
  • Anna Henderson wins silver in women's time trial
  • ]]>





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    English partnership Matty Lee and Noah Williams win synchronised diving gold at Commonwealth Games

  • Commonwealth Games 2022 schedule: Daily guide plus key events to watch out for
  • Geraint Thomas wins bronze but early crash costs him gold
  • Andrea Spendolini Sirieix wins diving gold with famous father Fred in crowd
  • ]]>




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    World champion Jake Wightman grasps Commonwealth Games bronze in savage 1,500m

  • England beat New Zealand to reach women's hockey final
  • Australia crush England's hopes of second successive netball gold
  • Nick Miller wins gold for England in the hammer
  • India edge England to make T20 cricket final
  • ]]>





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    England women stripped of relay title after men’s 4x100 metres team land Commonwealth Games gold

  • England 'swing' brings Commonwealth hockey gold home
  • Laura Muir bounces back to win 1,500m on a golden night
  • Delicious Orie hopes to follow in Anthony Johsua's footsteps
  • Geraint Thomas unable to regain title in final Wales outing
  • ]]>




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    Diving gold again for brilliant 17-year-old Andrea Spendolini-Sirieix on final day of Commonwealth Games

  • Oliver Brown on the 'lunacy' of Team Australia's Covid policies
  • Laura Muir's 1500m gold | England women's hockey gold report
  • England women stripped of their relay title for lane infringement 
  • Delicious Orie, gold medal boxer who wants to be the next AJ
  • Commonwealth Games 2022 medal table: which country came top 
  • ]]>





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    The complicated role loneliness plays in 26 common health conditions

    Loneliness was long thought to cause health conditions ranging from diabetes to cardiovascular disease, but new research paints a more nuanced picture




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    The Startup Economy is Turbulent. Here’s How Founders Can Recognize and Avoid Common Pitfalls

    While startups in highly regulated industries like healthcare and finance are almost certain to face heightened scrutiny, there are controllable factors that can offset these challenges.

    The post The Startup Economy is Turbulent. Here’s How Founders Can Recognize and Avoid Common Pitfalls appeared first on MedCity News.




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    For the Common Defense Study Group: Key Themes from the Fall 2023 Seminar Series

    The Belfer Center's National Security Fellows (NSFs), as part of the Defense, Emerging Technology, and Strategy (DETS) program, developed and taught the "For the Common Defense" study group throughout the Fall 2023 semester. Each “Common Defense” seminar is an in-depth exploration of a national security or defense-related subject taught by senior defense officials. Over the course of eight seminars, this study group examined key foreign policy topics, including Russia’s invasion of Ukraine and great power competition.

     




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    What Do Africa and the Arctic Have in Common? A Lot, It Turns Out

    As the climate crisis intensifies, demand is surging for minerals needed to manufacture clean energy technologies. In the race to secure supplies of critical minerals, Africa and the Arctic have taken center stage as companies and governments around the world eye their vast mineral deposits. These seemingly disparate regions now face the same question: how to capitalize on their mineral wealth while maximizing the socioeconomic benefits and minimizing the environmental harms of mining.




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    Onelink by First Alert� Brings Common Sense to the Smart Home Revolution - Onelink by First Alert

    The new HomeKit-enabled Onelink by First Alert� Wi-Fi Smoke + Carbon Monoxide (CO) Alarm pairs First Alert�s legacy of safety and innovation with Apple�s revolutionary HomeKit technology.




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    Antidepressant Use Common Among Reproductive-Aged Women - Antidepressants & Young Women

    Broll of pregnant women, doctors, prenatal exam, healthy & sick babies. Antidepressant use among reproductive-aged women is common. If you�re pregnant, or are planning a pregnancy, speak to your doctor right away.




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    Common Mistakes to Avoid in Food License Document Submission

    In this article, we shall outline the everyday mistakes made at some stage during the submission of food license documents and guide how to avoid them.




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    Not So Common... Now

    It's National Common Sense Day, minions, but how "common" is it, really? 

     Hmmm?

    When your faith in reading comprehension is also (crooked) and (going down).

      Candice asked them to write Skye with an E.

    Such a shame the baker didn't have enough room to write out "birthday."


    OH WAIT

    Kim wanted "2018 Angels" in the center.


    Then Lisa asked for a picture of a 20 sided die:

    There's something extra special about writing the word "picture" here, don't you think?

    And finally, Sharla just wanted her name on the cake.

    Oh, the pain.


    Thank to Rob M., Candice B., Kim T., Lisa P., & Sharla, for those... fascinating... finds.

    *****

    And from my other blog, Epbot:




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    Common Heart Medication, Beta Blockers, May Trigger Depression

    A Swedish study has challenged the widespread use of beta-blockers for all heart attack patients. While these medications are commonly prescribed to regulate




    common

    US Supreme Court Protects Access to Common Abortion Pill

    Access to a popular medlinkabortion pill/medlink will continue, as the US Supreme Court has ruled the drug can remain on the market while a lower court lawsuit is underway.




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    Five Common Signs of Low Immunity in Kids

    Highlights: Frequent infections and colds are common indicators of low immunity Chronic fatigue can hinder a chi




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    Natural Toxins Lurking in Common Foods

    Many individuals express concerns about the presence of chemicals, contaminants, or microplastics in their food. However, it's lesser-known that many




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    Genes Gone Wild: Common Gene Misbehavior in Healthy People

    Scientists have discovered that genes often defy expectations, turning on when they should be off in healthy individuals. The team also identify several mechanisms behind these gene activity errors.




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    Common Plastic Chemical Damages DNA in Reproductive Cells

    A common ingredient in plastic may cause breaks in DNA strands, leading to egg cells with an abnormal number of chromosomes in roundworms, reveals a new




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    Common Prostate Cancer Drugs Were Less Safe: New Study

    Men taking either abiraterone or enzalutamide for advanced prostate cancer who had also undergone hormone therapy were at increased risk of serious metabolic




    common

    Common Heart Medication, Beta Blockers, May Trigger Depression

    Common heart medications, like beta blockers, could have side effects including triggering depression in heart attack patients.




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    Man Who Made "Global Warming" a Common Term Died at 87

    All of us are familiar with the popular terminology "global warming" which could be found everywhere from school textbooks to huge international summits and conferences.




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    Uncovering the Causes and Cure for Common Type of High Blood Pressure

    A gene variant that is associated with the cause of medlinkhypertension/medlink or medlinkhigh blood pressure/medlink has been discovered by researchers (!--ref1--).




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    Amlodipine: A Common Blood Pressure Medication Deemed Safe for Use

    Recent research has demonstrated that a widely prescribed hypertension medication, medlinkamlodipine/medlink, is safe for patients. This finding contradicts




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    The most common kids Toys

    Toys can be described as objects designed and created to be used by kids. They are normally made of plastics, boxes, cloths or light metals. Remote control toys are available in different models such as vehicles, airplanes, dolls and...




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    Composition Of 9 Common Vegetables

    Composition (per 100 gm) Of 9 Common Vegetables.

    Understanding food and...




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    Common Myths About Venetian Blinds That You Need To Ignore

    Venetian blinds is a popular home decor item and can be mostly seen in Indian offices and homes in coastal areas. But then the charm of the blinds has made us to fall in love with them to try and experiment




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    Tamil Nadu Common Entrance Test (TANCET) 2017 Registration Begins

    The procedure for seeking admission to MBA, MCA, and M.E/ M.Tech/ M.Arch./ M.Plan. Degree programs for the academic year 2017-2018 consist of the following two steps: Appearing for the Tamil Nadu Common Entrance Test (TANCET) 2017 in March 2017.  Applying




    common

    Using Commonplace Books to Enrich Medieval and Renaissance Courses [Electronic book] / ed. by Sarah E. Parker, Andie Silva.

    Leeds : ARC Humanities Press, [2023]




    common

    Re-enchanting the world : feminism and the politics of the commons [Electronic book] / Silvia Federici.

    Oakland, CA : PM Press ; Brooklyn, NY : Autonomedia, [2019]




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    Governing universities in post-Soviet countries : from a common start, 1991-2021 [Electronic book] / edited by Peter D. Eckel, University of Pennsylvania.

    Cambridge : Cambridge University Press, 2023.




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    Climate change and the oil industry : Common problem, varying strategies [Electronic book] / Jon Birger Skjaerseth, Jon Skjaerseth, Tora Skodvin.

    Manchester : Manchester University Press, [2018]





    common

    Comforting common sense, woman to woman

    A companionable book filled with personal advice shared with honesty




    common

    Selection of DNA aptamers for detecting metronidazole and ibuprofen: two common additives in soft drinks

    Analyst, 2024, 149,5482-5490
    DOI: 10.1039/D4AN01186D, Paper
    Jin Wang, Xiangmei Li, Hongtao Lei, Juewen Liu
    Using capture-SELEX, short aptamers for metronidazole and ibuprofen were isolated and they can be used for the detection of these drugs illicitly added to soft drinks.
    The content of this RSS Feed (c) The Royal Society of Chemistry




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    I just pulled a 2006 and uploaded my holiday photos to Flickr with a Creative Commons Licence

    I just returned from a holiday on the gorgeous island of Corfu in Greece and spent quite some time taking photos. Instead of releasing those piecemeal on various social media channels, I thought it would be fun to go back to our ways of early social media, and put them all up on Flickr with […]




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    Why did the Centre sanction a 50% hike in prices of commonly-used drugs?

    According to the government the recent 50% hike in prices of eight drugs was sanctioned keeping in mind the larger public interest and to ensure continued availability of drugs