is Causal Discovery Toolbox: Uncovering causal relationships in Python By Published On :: 2020 This paper presents a new open source Python framework for causal discovery from observational data and domain background knowledge, aimed at causal graph and causal mechanism modeling. The cdt package implements an end-to-end approach, recovering the direct dependencies (the skeleton of the causal graph) and the causal relationships between variables. It includes algorithms from the `Bnlearn' and `Pcalg' packages, together with algorithms for pairwise causal discovery such as ANM. Full Article
is Switching Regression Models and Causal Inference in the Presence of Discrete Latent Variables By Published On :: 2020 Given a response $Y$ and a vector $X = (X^1, dots, X^d)$ of $d$ predictors, we investigate the problem of inferring direct causes of $Y$ among the vector $X$. Models for $Y$ that use all of its causal covariates as predictors enjoy the property of being invariant across different environments or interventional settings. Given data from such environments, this property has been exploited for causal discovery. Here, we extend this inference principle to situations in which some (discrete-valued) direct causes of $ Y $ are unobserved. Such cases naturally give rise to switching regression models. We provide sufficient conditions for the existence, consistency and asymptotic normality of the MLE in linear switching regression models with Gaussian noise, and construct a test for the equality of such models. These results allow us to prove that the proposed causal discovery method obtains asymptotic false discovery control under mild conditions. We provide an algorithm, make available code, and test our method on simulated data. It is robust against model violations and outperforms state-of-the-art approaches. We further apply our method to a real data set, where we show that it does not only output causal predictors, but also a process-based clustering of data points, which could be of additional interest to practitioners. Full Article
is Branch and Bound for Piecewise Linear Neural Network Verification By Published On :: 2020 The success of Deep Learning and its potential use in many safety-critical applicationshas motivated research on formal verification of Neural Network (NN) models. In thiscontext, verification involves proving or disproving that an NN model satisfies certaininput-output properties. Despite the reputation of learned NN models as black boxes,and the theoretical hardness of proving useful properties about them, researchers havebeen successful in verifying some classes of models by exploiting their piecewise linearstructure and taking insights from formal methods such as Satisifiability Modulo Theory.However, these methods are still far from scaling to realistic neural networks. To facilitateprogress on this crucial area, we exploit the Mixed Integer Linear Programming (MIP) formulation of verification to propose a family of algorithms based on Branch-and-Bound (BaB). We show that our family contains previous verification methods as special cases.With the help of the BaB framework, we make three key contributions. Firstly, we identifynew methods that combine the strengths of multiple existing approaches, accomplishingsignificant performance improvements over previous state of the art. Secondly, we introducean effective branching strategy on ReLU non-linearities. This branching strategy allows usto efficiently and successfully deal with high input dimensional problems with convolutionalnetwork architecture, on which previous methods fail frequently. Finally, we proposecomprehensive test data sets and benchmarks which includes a collection of previouslyreleased testcases. We use the data sets to conduct a thorough experimental comparison ofexisting and new algorithms and to provide an inclusive analysis of the factors impactingthe hardness of verification problems. Full Article
is Greedy Attack and Gumbel Attack: Generating Adversarial Examples for Discrete Data By Published On :: 2020 We present a probabilistic framework for studying adversarial attacks on discrete data. Based on this framework, we derive a perturbation-based method, Greedy Attack, and a scalable learning-based method, Gumbel Attack, that illustrate various tradeoffs in the design of attacks. We demonstrate the effectiveness of these methods using both quantitative metrics and human evaluation on various state-of-the-art models for text classification, including a word-based CNN, a character-based CNN and an LSTM. As an example of our results, we show that the accuracy of character-based convolutional networks drops to the level of random selection by modifying only five characters through Greedy Attack. Full Article
is Exact Guarantees on the Absence of Spurious Local Minima for Non-negative Rank-1 Robust Principal Component Analysis By Published On :: 2020 This work is concerned with the non-negative rank-1 robust principal component analysis (RPCA), where the goal is to recover the dominant non-negative principal components of a data matrix precisely, where a number of measurements could be grossly corrupted with sparse and arbitrary large noise. Most of the known techniques for solving the RPCA rely on convex relaxation methods by lifting the problem to a higher dimension, which significantly increase the number of variables. As an alternative, the well-known Burer-Monteiro approach can be used to cast the RPCA as a non-convex and non-smooth $ell_1$ optimization problem with a significantly smaller number of variables. In this work, we show that the low-dimensional formulation of the symmetric and asymmetric positive rank-1 RPCA based on the Burer-Monteiro approach has benign landscape, i.e., 1) it does not have any spurious local solution, 2) has a unique global solution, and 3) its unique global solution coincides with the true components. An implication of this result is that simple local search algorithms are guaranteed to achieve a zero global optimality gap when directly applied to the low-dimensional formulation. Furthermore, we provide strong deterministic and probabilistic guarantees for the exact recovery of the true principal components. In particular, it is shown that a constant fraction of the measurements could be grossly corrupted and yet they would not create any spurious local solution. Full Article
is Multiparameter Persistence Landscapes By Published On :: 2020 An important problem in the field of Topological Data Analysis is defining topological summaries which can be combined with traditional data analytic tools. In recent work Bubenik introduced the persistence landscape, a stable representation of persistence diagrams amenable to statistical analysis and machine learning tools. In this paper we generalise the persistence landscape to multiparameter persistence modules providing a stable representation of the rank invariant. We show that multiparameter landscapes are stable with respect to the interleaving distance and persistence weighted Wasserstein distance, and that the collection of multiparameter landscapes faithfully represents the rank invariant. Finally we provide example calculations and statistical tests to demonstrate a range of potential applications and how one can interpret the landscapes associated to a multiparameter module. Full Article
is WONDER: Weighted One-shot Distributed Ridge Regression in High Dimensions By Published On :: 2020 In many areas, practitioners need to analyze large data sets that challenge conventional single-machine computing. To scale up data analysis, distributed and parallel computing approaches are increasingly needed. Here we study a fundamental and highly important problem in this area: How to do ridge regression in a distributed computing environment? Ridge regression is an extremely popular method for supervised learning, and has several optimality properties, thus it is important to study. We study one-shot methods that construct weighted combinations of ridge regression estimators computed on each machine. By analyzing the mean squared error in a high-dimensional random-effects model where each predictor has a small effect, we discover several new phenomena. Infinite-worker limit: The distributed estimator works well for very large numbers of machines, a phenomenon we call 'infinite-worker limit'. Optimal weights: The optimal weights for combining local estimators sum to more than unity, due to the downward bias of ridge. Thus, all averaging methods are suboptimal. We also propose a new Weighted ONe-shot DistributEd Ridge regression algorithm (WONDER). We test WONDER in simulation studies and using the Million Song Dataset as an example. There it can save at least 100x in computation time, while nearly preserving test accuracy. Full Article
is The weight function in the subtree kernel is decisive By Published On :: 2020 Tree data are ubiquitous because they model a large variety of situations, e.g., the architecture of plants, the secondary structure of RNA, or the hierarchy of XML files. Nevertheless, the analysis of these non-Euclidean data is difficult per se. In this paper, we focus on the subtree kernel that is a convolution kernel for tree data introduced by Vishwanathan and Smola in the early 2000's. More precisely, we investigate the influence of the weight function from a theoretical perspective and in real data applications. We establish on a 2-classes stochastic model that the performance of the subtree kernel is improved when the weight of leaves vanishes, which motivates the definition of a new weight function, learned from the data and not fixed by the user as usually done. To this end, we define a unified framework for computing the subtree kernel from ordered or unordered trees, that is particularly suitable for tuning parameters. We show through eight real data classification problems the great efficiency of our approach, in particular for small data sets, which also states the high importance of the weight function. Finally, a visualization tool of the significant features is derived. Full Article
is Identifiability of Additive Noise Models Using Conditional Variances By Published On :: 2020 This paper considers a new identifiability condition for additive noise models (ANMs) in which each variable is determined by an arbitrary Borel measurable function of its parents plus an independent error. It has been shown that ANMs are fully recoverable under some identifiability conditions, such as when all error variances are equal. However, this identifiable condition could be restrictive, and hence, this paper focuses on a relaxed identifiability condition that involves not only error variances, but also the influence of parents. This new class of identifiable ANMs does not put any constraints on the form of dependencies, or distributions of errors, and allows different error variances. It further provides a statistically consistent and computationally feasible structure learning algorithm for the identifiable ANMs based on the new identifiability condition. The proposed algorithm assumes that all relevant variables are observed, while it does not assume faithfulness or a sparse graph. Demonstrated through extensive simulated and real multivariate data is that the proposed algorithm successfully recovers directed acyclic graphs. Full Article
is GADMM: Fast and Communication Efficient Framework for Distributed Machine Learning By Published On :: 2020 When the data is distributed across multiple servers, lowering the communication cost between the servers (or workers) while solving the distributed learning problem is an important problem and is the focus of this paper. In particular, we propose a fast, and communication-efficient decentralized framework to solve the distributed machine learning (DML) problem. The proposed algorithm, Group Alternating Direction Method of Multipliers (GADMM) is based on the Alternating Direction Method of Multipliers (ADMM) framework. The key novelty in GADMM is that it solves the problem in a decentralized topology where at most half of the workers are competing for the limited communication resources at any given time. Moreover, each worker exchanges the locally trained model only with two neighboring workers, thereby training a global model with a lower amount of communication overhead in each exchange. We prove that GADMM converges to the optimal solution for convex loss functions, and numerically show that it converges faster and more communication-efficient than the state-of-the-art communication-efficient algorithms such as the Lazily Aggregated Gradient (LAG) and dual averaging, in linear and logistic regression tasks on synthetic and real datasets. Furthermore, we propose Dynamic GADMM (D-GADMM), a variant of GADMM, and prove its convergence under the time-varying network topology of the workers. Full Article
is TIGER: using artificial intelligence to discover our collections By feedproxy.google.com Published On :: Tue, 10 Mar 2020 22:01:20 +0000 The State Library of NSW has almost 4 million digital files in its collection. Full Article
is Measuring symmetry and asymmetry of multiplicative distortion measurement errors data By projecteuclid.org Published On :: Mon, 04 May 2020 04:00 EDT Jun Zhang, Yujie Gai, Xia Cui, Gaorong Li. Source: Brazilian Journal of Probability and Statistics, Volume 34, Number 2, 370--393.Abstract: This paper studies the measure of symmetry or asymmetry of a continuous variable under the multiplicative distortion measurement errors setting. The unobservable variable is distorted in a multiplicative fashion by an observed confounding variable. First, two direct plug-in estimation procedures are proposed, and the empirical likelihood based confidence intervals are constructed to measure the symmetry or asymmetry of the unobserved variable. Next, we propose four test statistics for testing whether the unobserved variable is symmetric or not. The asymptotic properties of the proposed estimators and test statistics are examined. We conduct Monte Carlo simulation experiments to examine the performance of the proposed estimators and test statistics. These methods are applied to analyze a real dataset for an illustration. Full Article
is Reliability estimation in a multicomponent stress-strength model for Burr XII distribution under progressive censoring By projecteuclid.org Published On :: Mon, 04 May 2020 04:00 EDT Raj Kamal Maurya, Yogesh Mani Tripathi. Source: Brazilian Journal of Probability and Statistics, Volume 34, Number 2, 345--369.Abstract: We consider estimation of the multicomponent stress-strength reliability under progressive Type II censoring under the assumption that stress and strength variables follow Burr XII distributions with a common shape parameter. Maximum likelihood estimates of the reliability are obtained along with asymptotic intervals when common shape parameter may be known or unknown. Bayes estimates are also derived under the squared error loss function using different approximation methods. Further, we obtain exact Bayes and uniformly minimum variance unbiased estimates of the reliability for the case common shape parameter is known. The highest posterior density intervals are also obtained. We perform Monte Carlo simulations to compare the performance of proposed estimates and present a discussion based on this study. Finally, two real data sets are analyzed for illustration purposes. Full Article
is Bayesian modeling and prior sensitivity analysis for zero–one augmented beta regression models with an application to psychometric data By projecteuclid.org Published On :: Mon, 04 May 2020 04:00 EDT Danilo Covaes Nogarotto, Caio Lucidius Naberezny Azevedo, Jorge Luis Bazán. Source: Brazilian Journal of Probability and Statistics, Volume 34, Number 2, 304--322.Abstract: The interest on the analysis of the zero–one augmented beta regression (ZOABR) model has been increasing over the last few years. In this work, we developed a Bayesian inference for the ZOABR model, providing some contributions, namely: we explored the use of Jeffreys-rule and independence Jeffreys prior for some of the parameters, performing a sensitivity study of prior choice, comparing the Bayesian estimates with the maximum likelihood ones and measuring the accuracy of the estimates under several scenarios of interest. The results indicate, in a general way, that: the Bayesian approach, under the Jeffreys-rule prior, was as accurate as the ML one. Also, different from other approaches, we use the predictive distribution of the response to implement Bayesian residuals. To further illustrate the advantages of our approach, we conduct an analysis of a real psychometric data set including a Bayesian residual analysis, where it is shown that misleading inference can be obtained when the data is transformed. That is, when the zeros and ones are transformed to suitable values and the usual beta regression model is considered, instead of the ZOABR model. Finally, future developments are discussed. Full Article
is Random environment binomial thinning integer-valued autoregressive process with Poisson or geometric marginal By projecteuclid.org Published On :: Mon, 04 May 2020 04:00 EDT Zhengwei Liu, Qi Li, Fukang Zhu. Source: Brazilian Journal of Probability and Statistics, Volume 34, Number 2, 251--272.Abstract: To predict time series of counts with small values and remarkable fluctuations, an available model is the $r$ states random environment process based on the negative binomial thinning operator and the geometric marginal. However, we argue that the aforementioned model may suffer from the following two drawbacks. First, under the condition of no prior information, the overdispersed property of the geometric distribution may cause the predictions fluctuate greatly. Second, because of the constraints on the model parameters, some estimated parameters are close to zero in real-data examples, which may not objectively reveal the correlation relationship. For the first drawback, an $r$ states random environment process based on the binomial thinning operator and the Poisson marginal is introduced. For the second drawback, we propose a generalized $r$ states random environment integer-valued autoregressive model based on the binomial thinning operator to model fluctuations of data. Yule–Walker and conditional maximum likelihood estimates are considered and their performances are assessed via simulation studies. Two real-data sets are conducted to illustrate the better performances of the proposed models compared with some existing models. Full Article
is A note on the “L-logistic regression models: Prior sensitivity analysis, robustness to outliers and applications” By projecteuclid.org Published On :: Mon, 03 Feb 2020 04:00 EST Saralees Nadarajah, Yuancheng Si. Source: Brazilian Journal of Probability and Statistics, Volume 34, Number 1, 183--187.Abstract: Da Paz, Balakrishnan and Bazan [Braz. J. Probab. Stat. 33 (2019), 455–479] introduced the L-logistic distribution, studied its properties including estimation issues and illustrated a data application. This note derives a closed form expression for moment properties of the distribution. Some computational issues are discussed. Full Article
is Application of weighted and unordered majorization orders in comparisons of parallel systems with exponentiated generalized gamma components By projecteuclid.org Published On :: Mon, 03 Feb 2020 04:00 EST Abedin Haidari, Amir T. Payandeh Najafabadi, Narayanaswamy Balakrishnan. Source: Brazilian Journal of Probability and Statistics, Volume 34, Number 1, 150--166.Abstract: Consider two parallel systems, say $A$ and $B$, with respective lifetimes $T_{1}$ and $T_{2}$ wherein independent component lifetimes of each system follow exponentiated generalized gamma distribution with possibly different exponential shape and scale parameters. We show here that $T_{2}$ is smaller than $T_{1}$ with respect to the usual stochastic order (reversed hazard rate order) if the vector of logarithm (the main vector) of scale parameters of System $B$ is weakly weighted majorized by that of System $A$, and if the vector of exponential shape parameters of System $A$ is unordered mojorized by that of System $B$. By means of some examples, we show that the above results can not be extended to the hazard rate and likelihood ratio orders. However, when the scale parameters of each system divide into two homogeneous groups, we verify that the usual stochastic and reversed hazard rate orders can be extended, respectively, to the hazard rate and likelihood ratio orders. The established results complete and strengthen some of the known results in the literature. Full Article
is Nonparametric discrimination of areal functional data By projecteuclid.org Published On :: Mon, 03 Feb 2020 04:00 EST Ahmad Younso. Source: Brazilian Journal of Probability and Statistics, Volume 34, Number 1, 112--126.Abstract: We consider a new nonparametric rule of classification, inspired from the classical moving window rule, that allows for the classification of spatially dependent functional data containing some completely missing curves. We investigate the consistency of this classifier under mild conditions. The practical use of the classifier will be illustrated through simulation studies. Full Article
is On the Nielsen distribution By projecteuclid.org Published On :: Mon, 03 Feb 2020 04:00 EST Fredy Castellares, Artur J. Lemonte, Marcos A. C. Santos. Source: Brazilian Journal of Probability and Statistics, Volume 34, Number 1, 90--111.Abstract: We introduce a two-parameter discrete distribution that may have a zero vertex and can be useful for modeling overdispersion. The discrete Nielsen distribution generalizes the Fisher logarithmic (i.e., logarithmic series) and Stirling type I distributions in the sense that both can be considered displacements of the Nielsen distribution. We provide a comprehensive account of the structural properties of the new discrete distribution. We also show that the Nielsen distribution is infinitely divisible. We discuss maximum likelihood estimation of the model parameters and provide a simple method to find them numerically. The usefulness of the proposed distribution is illustrated by means of three real data sets to prove its versatility in practical applications. Full Article
is Bayesian inference on power Lindley distribution based on different loss functions By projecteuclid.org Published On :: Mon, 26 Aug 2019 04:00 EDT Abbas Pak, M. E. Ghitany, Mohammad Reza Mahmoudi. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 4, 894--914.Abstract: This paper focuses on Bayesian estimation of the parameters and reliability function of the power Lindley distribution by using various symmetric and asymmetric loss functions. Assuming suitable priors on the parameters, Bayes estimates are derived by using squared error, linear exponential (linex) and general entropy loss functions. Since, under these loss functions, Bayes estimates of the parameters do not have closed forms we use lindley’s approximation technique to calculate the Bayes estimates. Moreover, we obtain the Bayes estimates of the parameters using a Markov Chain Monte Carlo (MCMC) method. Simulation studies are conducted in order to evaluate the performances of the proposed estimators under the considered loss functions. Finally, analysis of a real data set is presented for illustrative purposes. Full Article
is Bayesian approach for the zero-modified Poisson–Lindley regression model By projecteuclid.org Published On :: Mon, 26 Aug 2019 04:00 EDT Wesley Bertoli, Katiane S. Conceição, Marinho G. Andrade, Francisco Louzada. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 4, 826--860.Abstract: The primary goal of this paper is to introduce the zero-modified Poisson–Lindley regression model as an alternative to model overdispersed count data exhibiting inflation or deflation of zeros in the presence of covariates. The zero-modification is incorporated by considering that a zero-truncated process produces positive observations and consequently, the proposed model can be fitted without any previous information about the zero-modification present in a given dataset. A fully Bayesian approach based on the g-prior method has been considered for inference concerns. An intensive Monte Carlo simulation study has been conducted to evaluate the performance of the developed methodology and the maximum likelihood estimators. The proposed model was considered for the analysis of a real dataset on the number of bids received by $126$ U.S. firms between 1978–1985, and the impact of choosing different prior distributions for the regression coefficients has been studied. A sensitivity analysis to detect influential points has been performed based on the Kullback–Leibler divergence. A general comparison with some well-known regression models for discrete data has been presented. Full Article
is Option pricing with bivariate risk-neutral density via copula and heteroscedastic model: A Bayesian approach By projecteuclid.org Published On :: Mon, 26 Aug 2019 04:00 EDT Lucas Pereira Lopes, Vicente Garibay Cancho, Francisco Louzada. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 4, 801--825.Abstract: Multivariate options are adequate tools for multi-asset risk management. The pricing models derived from the pioneer Black and Scholes method under the multivariate case consider that the asset-object prices follow a Brownian geometric motion. However, the construction of such methods imposes some unrealistic constraints on the process of fair option calculation, such as constant volatility over the maturity time and linear correlation between the assets. Therefore, this paper aims to price and analyze the fair price behavior of the call-on-max (bivariate) option considering marginal heteroscedastic models with dependence structure modeled via copulas. Concerning inference, we adopt a Bayesian perspective and computationally intensive methods based on Monte Carlo simulations via Markov Chain (MCMC). A simulation study examines the bias, and the root mean squared errors of the posterior means for the parameters. Real stocks prices of Brazilian banks illustrate the approach. For the proposed method is verified the effects of strike and dependence structure on the fair price of the option. The results show that the prices obtained by our heteroscedastic model approach and copulas differ substantially from the prices obtained by the model derived from Black and Scholes. Empirical results are presented to argue the advantages of our strategy. Full Article
is Bayesian modelling of the abilities in dichotomous IRT models via regression with missing values in the covariates By projecteuclid.org Published On :: Mon, 26 Aug 2019 04:00 EDT Flávio B. Gonçalves, Bárbara C. C. Dias. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 4, 782--800.Abstract: Educational assessment usually considers a contextual questionnaire to extract relevant information from the applicants. This may include items related to socio-economical profile as well as items to extract other characteristics potentially related to applicant’s performance in the test. A careful analysis of the questionnaires jointly with the test’s results may evidence important relations between profiles and test performance. The most coherent way to perform this task in a statistical context is to use the information from the questionnaire to help explain the variability of the abilities in a joint model-based approach. Nevertheless, the responses to the questionnaire typically present missing values which, in some cases, may be missing not at random. This paper proposes a statistical methodology to model the abilities in dichotomous IRT models using the information of the contextual questionnaires via linear regression. The proposed methodology models the missing data jointly with the all the observed data, which allows for the estimation of the former. The missing data modelling is flexible enough to allow the specification of missing not at random structures. Furthermore, even if those structures are not assumed a priori, they can be estimated from the posterior results when assuming missing (completely) at random structures a priori. Statistical inference is performed under the Bayesian paradigm via an efficient MCMC algorithm. Simulated and real examples are presented to investigate the efficiency and applicability of the proposed methodology. Full Article
is Time series of count data: A review, empirical comparisons and data analysis By projecteuclid.org Published On :: Mon, 26 Aug 2019 04:00 EDT Glaura C. Franco, Helio S. Migon, Marcos O. Prates. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 4, 756--781.Abstract: Observation and parameter driven models are commonly used in the literature to analyse time series of counts. In this paper, we study the characteristics of a variety of models and point out the main differences and similarities among these procedures, concerning parameter estimation, model fitting and forecasting. Alternatively to the literature, all inference was performed under the Bayesian paradigm. The models are fitted with a latent AR($p$) process in the mean, which accounts for autocorrelation in the data. An extensive simulation study shows that the estimates for the covariate parameters are remarkably similar across the different models. However, estimates for autoregressive coefficients and forecasts of future values depend heavily on the underlying process which generates the data. A real data set of bankruptcy in the United States is also analysed. Full Article
is Bayesian hypothesis testing: Redux By projecteuclid.org Published On :: Mon, 26 Aug 2019 04:00 EDT Hedibert F. Lopes, Nicholas G. Polson. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 4, 745--755.Abstract: Bayesian hypothesis testing is re-examined from the perspective of an a priori assessment of the test statistic distribution under the alternative. By assessing the distribution of an observable test statistic, rather than prior parameter values, we revisit the seminal paper of Edwards, Lindman and Savage ( Psychol. Rev. 70 (1963) 193–242). There are a number of important take-aways from comparing the Bayesian paradigm via Bayes factors to frequentist ones. We provide examples where evidence for a Bayesian strikingly supports the null, but leads to rejection under a classical test. Finally, we conclude with directions for future research. Full Article
is The limiting distribution of the Gibbs sampler for the intrinsic conditional autoregressive model By projecteuclid.org Published On :: Mon, 26 Aug 2019 04:00 EDT Marco A. R. Ferreira. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 4, 734--744.Abstract: We study the limiting behavior of the one-at-a-time Gibbs sampler for the intrinsic conditional autoregressive model with centering on the fly. The intrinsic conditional autoregressive model is widely used as a prior for random effects in hierarchical models for spatial modeling. This model is defined by full conditional distributions that imply an improper joint “density” with a multivariate Gaussian kernel and a singular precision matrix. To guarantee propriety of the posterior distribution, usually at the end of each iteration of the Gibbs sampler the random effects are centered to sum to zero in what is widely known as centering on the fly. While this works well in practice, this informal computational way to recenter the random effects obscures their implied prior distribution and prevents the development of formal Bayesian procedures. Here we show that the implied prior distribution, that is, the limiting distribution of the one-at-a-time Gibbs sampler for the intrinsic conditional autoregressive model with centering on the fly is a singular Gaussian distribution with a covariance matrix that is the Moore–Penrose inverse of the precision matrix. This result has important implications for the development of formal Bayesian procedures such as reference priors and Bayes-factor-based model selection for spatial models. Full Article
is L-Logistic regression models: Prior sensitivity analysis, robustness to outliers and applications By projecteuclid.org Published On :: Mon, 10 Jun 2019 04:04 EDT Rosineide F. da Paz, Narayanaswamy Balakrishnan, Jorge Luis Bazán. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 3, 455--479.Abstract: Tadikamalla and Johnson [ Biometrika 69 (1982) 461–465] developed the $L_{B}$ distribution to variables with bounded support by considering a transformation of the standard Logistic distribution. In this manuscript, a convenient parametrization of this distribution is proposed in order to develop regression models. This distribution, referred to here as L-Logistic distribution, provides great flexibility and includes the uniform distribution as a particular case. Several properties of this distribution are studied, and a Bayesian approach is adopted for the parameter estimation. Simulation studies, considering prior sensitivity analysis, recovery of parameters and comparison of algorithms, and robustness to outliers are all discussed showing that the results are insensitive to the choice of priors, efficiency of the algorithm MCMC adopted, and robustness of the model when compared with the beta distribution. Applications to estimate the vulnerability to poverty and to explain the anxiety are performed. The results to applications show that the L-Logistic regression models provide a better fit than the corresponding beta regression models. Full Article
is A rank-based Cramér–von-Mises-type test for two samples By projecteuclid.org Published On :: Mon, 10 Jun 2019 04:04 EDT Jamye Curry, Xin Dang, Hailin Sang. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 3, 425--454.Abstract: We study a rank based univariate two-sample distribution-free test. The test statistic is the difference between the average of between-group rank distances and the average of within-group rank distances. This test statistic is closely related to the two-sample Cramér–von Mises criterion. They are different empirical versions of a same quantity for testing the equality of two population distributions. Although they may be different for finite samples, they share the same expected value, variance and asymptotic properties. The advantage of the new rank based test over the classical one is its ease to generalize to the multivariate case. Rather than using the empirical process approach, we provide a different easier proof, bringing in a different perspective and insight. In particular, we apply the Hájek projection and orthogonal decomposition technique in deriving the asymptotics of the proposed rank based statistic. A numerical study compares power performance of the rank formulation test with other commonly-used nonparametric tests and recommendations on those tests are provided. Lastly, we propose a multivariate extension of the test based on the spatial rank. Full Article
is Hierarchical modelling of power law processes for the analysis of repairable systems with different truncation times: An empirical Bayes approach By projecteuclid.org Published On :: Mon, 04 Mar 2019 04:00 EST Rodrigo Citton P. dos Reis, Enrico A. Colosimo, Gustavo L. Gilardoni. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 2, 374--396.Abstract: In the data analysis from multiple repairable systems, it is usual to observe both different truncation times and heterogeneity among the systems. Among other reasons, the latter is caused by different manufacturing lines and maintenance teams of the systems. In this paper, a hierarchical model is proposed for the statistical analysis of multiple repairable systems under different truncation times. A reparameterization of the power law process is proposed in order to obtain a quasi-conjugate bayesian analysis. An empirical Bayes approach is used to estimate model hyperparameters. The uncertainty in the estimate of these quantities are corrected by using a parametric bootstrap approach. The results are illustrated in a real data set of failure times of power transformers from an electric company in Brazil. Full Article
is Necessary and sufficient conditions for the convergence of the consistent maximal displacement of the branching random walk By projecteuclid.org Published On :: Mon, 04 Mar 2019 04:00 EST Bastien Mallein. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 2, 356--373.Abstract: Consider a supercritical branching random walk on the real line. The consistent maximal displacement is the smallest of the distances between the trajectories followed by individuals at the $n$th generation and the boundary of the process. Fang and Zeitouni, and Faraud, Hu and Shi proved that under some integrability conditions, the consistent maximal displacement grows almost surely at rate $lambda^{*}n^{1/3}$ for some explicit constant $lambda^{*}$. We obtain here a necessary and sufficient condition for this asymptotic behaviour to hold. Full Article
is Failure rate of Birnbaum–Saunders distributions: Shape, change-point, estimation and robustness By projecteuclid.org Published On :: Mon, 04 Mar 2019 04:00 EST Emilia Athayde, Assis Azevedo, Michelli Barros, Víctor Leiva. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 2, 301--328.Abstract: The Birnbaum–Saunders (BS) distribution has been largely studied and applied. A random variable with BS distribution is a transformation of another random variable with standard normal distribution. Generalized BS distributions are obtained when the normally distributed random variable is replaced by another symmetrically distributed random variable. This allows us to obtain a wide class of positively skewed models with lighter and heavier tails than the BS model. Its failure rate admits several shapes, including the unimodal case, with its change-point being able to be used for different purposes. For example, to establish the reduction in a dose, and then in the cost of the medical treatment. We analyze the failure rates of generalized BS distributions obtained by the logistic, normal and Student-t distributions, considering their shape and change-point, estimating them, evaluating their robustness, assessing their performance by simulations, and applying the results to real data from different areas. Full Article
is The coreset variational Bayes (CVB) algorithm for mixture analysis By projecteuclid.org Published On :: Mon, 04 Mar 2019 04:00 EST Qianying Liu, Clare A. McGrory, Peter W. J. Baxter. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 2, 267--279.Abstract: The pressing need for improved methods for analysing and coping with big data has opened up a new area of research for statisticians. Image analysis is an area where there is typically a very large number of data points to be processed per image, and often multiple images are captured over time. These issues make it challenging to design methodology that is reliable and yet still efficient enough to be of practical use. One promising emerging approach for this problem is to reduce the amount of data that actually has to be processed by extracting what we call coresets from the full dataset; analysis is then based on the coreset rather than the whole dataset. Coresets are representative subsamples of data that are carefully selected via an adaptive sampling approach. We propose a new approach called coreset variational Bayes (CVB) for mixture modelling; this is an algorithm which can perform a variational Bayes analysis of a dataset based on just an extracted coreset of the data. We apply our algorithm to weed image analysis. Full Article
is Simple tail index estimation for dependent and heterogeneous data with missing values By projecteuclid.org Published On :: Mon, 14 Jan 2019 04:01 EST Ivana Ilić, Vladica M. Veličković. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 1, 192--203.Abstract: Financial returns are known to be nonnormal and tend to have fat-tailed distribution. Also, the dependence of large values in a stochastic process is an important topic in risk, insurance and finance. In the presence of missing values, we deal with the asymptotic properties of a simple “median” estimator of the tail index based on random variables with the heavy-tailed distribution function and certain dependence among the extremes. Weak consistency and asymptotic normality of the proposed estimator are established. The estimator is a special case of a well-known estimator defined in Bacro and Brito [ Statistics & Decisions 3 (1993) 133–143]. The advantage of the estimator is its robustness against deviations and compared to Hill’s, it is less affected by the fluctuations related to the maximum of the sample or by the presence of outliers. Several examples are analyzed in order to support the proofs. Full Article
is The equivalence of dynamic and static asset allocations under the uncertainty caused by Poisson processes By projecteuclid.org Published On :: Mon, 14 Jan 2019 04:01 EST Yong-Chao Zhang, Na Zhang. Source: Brazilian Journal of Probability and Statistics, Volume 33, Number 1, 184--191.Abstract: We investigate the equivalence of dynamic and static asset allocations in the case where the price process of a risky asset is driven by a Poisson process. Under some mild conditions, we obtain a necessary and sufficient condition for the equivalence of dynamic and static asset allocations. In addition, we provide a simple sufficient condition for the equivalence. Full Article
is Unlikeness is us : fourteen from the Exeter book By dal.novanet.ca Published On :: Fri, 1 May 2020 19:34:09 -0300 Author: Exeter book. Selections. EnglishCallnumber: PS 8631 A8489 E94 2018ISBN: 9781554471751 (softcover) Full Article
is NDN coping mechanisms : notes from the field By dal.novanet.ca Published On :: Fri, 1 May 2020 19:34:09 -0300 Author: Belcourt, Billy-Ray, author.Callnumber: PS 8603 E516 N46 2019ISBN: 9781487005771 (softcover) Full Article
is Novel bodies : disability and sexuality in eighteenth-century British literature By dal.novanet.ca Published On :: Fri, 1 May 2020 19:34:09 -0300 Author: Farr, Jason S., 1978- author.Callnumber: PR 858 P425 F37 2019ISBN: 9781684481088 hardcover alkaline paper Full Article
is Globalizing capital : a history of the international monetary system By dal.novanet.ca Published On :: Fri, 1 May 2020 19:34:09 -0300 Author: Eichengreen, Barry J., author.Callnumber: HG 3881 E347 2019ISBN: 9780691193908 (paperback) Full Article
is Fully grown : why a stagnant economy is a sign of success By dal.novanet.ca Published On :: Fri, 1 May 2020 19:34:09 -0300 Author: Vollrath, Dietrich, author.Callnumber: HC 110 E44 V65 2020ISBN: 9780226666006 hardcover Full Article
is Figuring racism in medieval Christianity By dal.novanet.ca Published On :: Fri, 1 May 2020 19:34:09 -0300 Author: Kaplan, M. Lindsay, author.Callnumber: BT 734.2 K354 2019ISBN: 9780190678241 hardcover alkaline paper Full Article
is Flexible, boundary adapted, nonparametric methods for the estimation of univariate piecewise-smooth functions By projecteuclid.org Published On :: Tue, 04 Feb 2020 04:00 EST Umberto Amato, Anestis Antoniadis, Italia De Feis. Source: Statistics Surveys, Volume 14, 32--70.Abstract: We present and compare some nonparametric estimation methods (wavelet and/or spline-based) designed to recover a one-dimensional piecewise-smooth regression function in both a fixed equidistant or not equidistant design regression model and a random design model. Wavelet methods are known to be very competitive in terms of denoising and compression, due to the simultaneous localization property of a function in time and frequency. However, boundary assumptions, such as periodicity or symmetry, generate bias and artificial wiggles which degrade overall accuracy. Simple methods have been proposed in the literature for reducing the bias at the boundaries. We introduce new ones based on adaptive combinations of two estimators. The underlying idea is to combine a highly accurate method for non-regular functions, e.g., wavelets, with one well behaved at boundaries, e.g., Splines or Local Polynomial. We provide some asymptotic optimal results supporting our approach. All the methods can handle data with a random design. We also sketch some generalization to the multidimensional setting. To study the performance of the proposed approaches we have conducted an extensive set of simulations on synthetic data. An interesting regression analysis of two real data applications using these procedures unambiguously demonstrates their effectiveness. Full Article
is Scalar-on-function regression for predicting distal outcomes from intensively gathered longitudinal data: Interpretability for applied scientists By projecteuclid.org Published On :: Tue, 05 Nov 2019 22:03 EST John J. Dziak, Donna L. Coffman, Matthew Reimherr, Justin Petrovich, Runze Li, Saul Shiffman, Mariya P. Shiyko. Source: Statistics Surveys, Volume 13, 150--180.Abstract: Researchers are sometimes interested in predicting a distal or external outcome (such as smoking cessation at follow-up) from the trajectory of an intensively recorded longitudinal variable (such as urge to smoke). This can be done in a semiparametric way via scalar-on-function regression. However, the resulting fitted coefficient regression function requires special care for correct interpretation, as it represents the joint relationship of time points to the outcome, rather than a marginal or cross-sectional relationship. We provide practical guidelines, based on experience with scientific applications, for helping practitioners interpret their results and illustrate these ideas using data from a smoking cessation study. Full Article
is PLS for Big Data: A unified parallel algorithm for regularised group PLS By projecteuclid.org Published On :: Mon, 02 Sep 2019 04:00 EDT Pierre Lafaye de Micheaux, Benoît Liquet, Matthew Sutton. Source: Statistics Surveys, Volume 13, 119--149.Abstract: Partial Least Squares (PLS) methods have been heavily exploited to analyse the association between two blocks of data. These powerful approaches can be applied to data sets where the number of variables is greater than the number of observations and in the presence of high collinearity between variables. Different sparse versions of PLS have been developed to integrate multiple data sets while simultaneously selecting the contributing variables. Sparse modeling is a key factor in obtaining better estimators and identifying associations between multiple data sets. The cornerstone of the sparse PLS methods is the link between the singular value decomposition (SVD) of a matrix (constructed from deflated versions of the original data) and least squares minimization in linear regression. We review four popular PLS methods for two blocks of data. A unified algorithm is proposed to perform all four types of PLS including their regularised versions. We present various approaches to decrease the computation time and show how the whole procedure can be scalable to big data sets. The bigsgPLS R package implements our unified algorithm and is available at https://github.com/matt-sutton/bigsgPLS . Full Article
is Basic models and questions in statistical network analysis By projecteuclid.org Published On :: Thu, 07 Sep 2017 22:02 EDT Miklós Z. Rácz, Sébastien Bubeck. Source: Statistics Surveys, Volume 11, 1--47.Abstract: Extracting information from large graphs has become an important statistical problem since network data is now common in various fields. In this minicourse we will investigate the most natural statistical questions for three canonical probabilistic models of networks: (i) community detection in the stochastic block model, (ii) finding the embedding of a random geometric graph, and (iii) finding the original vertex in a preferential attachment tree. Along the way we will cover many interesting topics in probability theory such as Pólya urns, large deviation theory, concentration of measure in high dimension, entropic central limit theorems, and more. Full Article
is A comparison of spatial predictors when datasets could be very large By projecteuclid.org Published On :: Tue, 19 Jul 2016 14:13 EDT Jonathan R. Bradley, Noel Cressie, Tao Shi. Source: Statistics Surveys, Volume 10, 100--131.Abstract: In this article, we review and compare a number of methods of spatial prediction, where each method is viewed as an algorithm that processes spatial data. To demonstrate the breadth of available choices, we consider both traditional and more-recently-introduced spatial predictors. Specifically, in our exposition we review: traditional stationary kriging, smoothing splines, negative-exponential distance-weighting, fixed rank kriging, modified predictive processes, a stochastic partial differential equation approach, and lattice kriging. This comparison is meant to provide a service to practitioners wishing to decide between spatial predictors. Hence, we provide technical material for the unfamiliar, which includes the definition and motivation for each (deterministic and stochastic) spatial predictor. We use a benchmark dataset of $mathrm{CO}_{2}$ data from NASA’s AIRS instrument to address computational efficiencies that include CPU time and memory usage. Furthermore, the predictive performance of each spatial predictor is assessed empirically using a hold-out subset of the AIRS data. Full Article
is Statistical inference for dynamical systems: A review By projecteuclid.org Published On :: Tue, 10 Nov 2015 09:20 EST Kevin McGoff, Sayan Mukherjee, Natesh Pillai. Source: Statistics Surveys, Volume 9, 209--252.Abstract: The topic of statistical inference for dynamical systems has been studied widely across several fields. In this survey we focus on methods related to parameter estimation for nonlinear dynamical systems. Our objective is to place results across distinct disciplines in a common setting and highlight opportunities for further research. Full Article
is Some models and methods for the analysis of observational data By projecteuclid.org Published On :: Tue, 15 Sep 2015 20:40 EDT José A. Ferreira. Source: Statistics Surveys, Volume 9, 106--208.Abstract: This article provides a concise and essentially self-contained exposition of some of the most important models and non-parametric methods for the analysis of observational data, and a substantial number of illustrations of their application. Although for the most part our presentation follows P. Rosenbaum’s book, “Observational Studies”, and naturally draws on related literature, it contains original elements and simplifies and generalizes some basic results. The illustrations, based on simulated data, show the methods at work in some detail, highlighting pitfalls and emphasizing certain subjective aspects of the statistical analyses. Full Article
is Errata: A survey of Bayesian predictive methods for model assessment, selection and comparison By projecteuclid.org Published On :: Wed, 26 Feb 2014 09:10 EST Aki Vehtari, Janne Ojanen. Source: Statistics Surveys, Volume 8, , 1--1.Abstract: Errata for “A survey of Bayesian predictive methods for model assessment, selection and comparison” by A. Vehtari and J. Ojanen, Statistics Surveys , 6 (2012), 142–228. doi:10.1214/12-SS102. Full Article
is Analyzing complex functional brain networks: Fusing statistics and network science to understand the brain By projecteuclid.org Published On :: Mon, 28 Oct 2013 09:06 EDT Sean L. Simpson, F. DuBois Bowman, Paul J. LaurientiSource: Statist. Surv., Volume 7, 1--36.Abstract: Complex functional brain network analyses have exploded over the last decade, gaining traction due to their profound clinical implications. The application of network science (an interdisciplinary offshoot of graph theory) has facilitated these analyses and enabled examining the brain as an integrated system that produces complex behaviors. While the field of statistics has been integral in advancing activation analyses and some connectivity analyses in functional neuroimaging research, it has yet to play a commensurate role in complex network analyses. Fusing novel statistical methods with network-based functional neuroimage analysis will engender powerful analytical tools that will aid in our understanding of normal brain function as well as alterations due to various brain disorders. Here we survey widely used statistical and network science tools for analyzing fMRI network data and discuss the challenges faced in filling some of the remaining methodological gaps. When applied and interpreted correctly, the fusion of network scientific and statistical methods has a chance to revolutionize the understanding of brain function. Full Article
is A survey of Bayesian predictive methods for model assessment, selection and comparison By projecteuclid.org Published On :: Thu, 27 Dec 2012 12:22 EST Aki Vehtari, Janne OjanenSource: Statist. Surv., Volume 6, 142--228.Abstract: To date, several methods exist in the statistical literature for model assessment, which purport themselves specifically as Bayesian predictive methods. The decision theoretic assumptions on which these methods are based are not always clearly stated in the original articles, however. The aim of this survey is to provide a unified review of Bayesian predictive model assessment and selection methods, and of methods closely related to them. We review the various assumptions that are made in this context and discuss the connections between different approaches, with an emphasis on how each method approximates the expected utility of using a Bayesian model for the purpose of predicting future data. Full Article