dia 1st batch of 326 Indians stranded in U.K. arrives in Mumbai By www.thehindu.com Published On :: Sun, 10 May 2020 09:52:09 +0530 The first batch of 326 Indian nationals stranded in the U.K. due to the coronavirus-linked global travel restrictions arrived in Mumbai from London ea Full Article Mumbai
dia Coronavirus India lockdown Day 47 updates | Death toll crosses 2,100 By www.thehindu.com Published On :: Sun, 10 May 2020 12:14:10 +0530 Globally, as of 9 May 2020, there have been 3,862,676 confirmed cases, including 265,961 deaths, reported to WHO. Full Article National
dia Indian naval ship arrives in Kochi with evacuees from the Maldives By www.thehindu.com Published On :: Sun, 10 May 2020 11:04:21 +0530 Most of the 698 Indians, of whom 440 are from Kerala, were stranded in the island country after they lost their jobs Full Article Kochi
dia India, China troops face off at Naku La in Sikkim, several injured By www.thehindu.com Published On :: Sun, 10 May 2020 12:01:51 +0530 Troops disengaged after dialogue and interaction at local level, Army sources said Full Article National
dia Watch | Liquor shops reopen in several Indian States By www.thehindu.com Published On :: Sun, 10 May 2020 12:05:20 +0530 A video on the opening of liquor shops after the easing of the COVID-19 lockdown in India Full Article National
dia How India can make its economic recovery clean, sustainable post Covid-19 By www.business-standard.com Published On :: Sat, 09 May 2020 21:47:00 +0530 The renewable sector holds the key to not only offsetting the job losses due to the pandemic, but also making the recovery sustainable Full Article
dia India’s fuel consumption dips 46 per cent in April; expected to rebound in May By www.thehindubusinessline.com Published On :: Sun, 10 May 2020 12:21:31 +0530 Petrol sales were down 60.43 per cent to 9,73,000 tonnes in April Full Article Economy
dia India plans over 100 flights during second phase of evacuation abroad By www.thehindubusinessline.com Published On :: Sat, 09 May 2020 21:07:28 +0530 To link countries where no Indian carrier presently flies Full Article Logistics
dia Naval ship arrives in Kochi with 698 repatriated Indians from Maldives By www.thehindubusinessline.com Published On :: Sun, 10 May 2020 11:15:57 +0530 Passengers showing Covid-19 symptoms are being disembarked first, followed by others in small groups, district-wise, says a Cochin Port Trust official Full Article National
dia Covid-19 in India: Death toll rises to 2,109; cases climb to 62,939 By www.thehindubusinessline.com Published On :: Sun, 10 May 2020 11:07:19 +0530 Maharashtra tops the tally with 779 deaths Full Article News
dia Super Moms! After Sushmita Sen's Miss India episode, Debina Bonnerjee's mom turns TV actor to Kajol from 'Baazigar' By www.dnaindia.com Published On :: Sun, 10 May 2020 02:34:00 GMT Sushmita Sen won Miss India with a dress selected by a mother, and similarly, Debina played an important role resembling Kajol from Baazigar thanks to her mom Full Article Entertainment Television
dia 'Vande Bharat': First evacuation flight from London lands in Mumbai; 1,373 Indians return home from worldwide By www.dnaindia.com Published On :: Sun, 10 May 2020 04:07:00 GMT In total, around 1,373 Indians returned to their native places from foreign countries on May 10 as eight 'Vande Bharat' flights from Dubai, Kuwait, Muscat, Sharjah, Kuala Lumpur, and Dhaka landed in India. Full Article India
dia Coronavirus Outbreak: COVID-19 tally in India nears 63,000-mark; death toll tops 2,000-mark By www.dnaindia.com Published On :: Sun, 10 May 2020 04:44:00 GMT Maharashtra has the highest number of cases with around 20,228 positive cases of infection and 779 deaths. Full Article India
dia Online Chess: India suffers twin defeats, finishes 5th By www.rediff.com Published On :: Sat, 09 May 2020 23:22:02 +0530 With Viswanathan Anand resting, the Indian team managed to hold their own against the favourites before Yu Yangyi subdued B Adhiban with black pieces to secure another victory in the tournament. Full Article
dia Naval ship arrives in Kochi with Indians from Maldives By www.rediff.com Published On :: Sun, 10 May 2020 11:37:09 +0530 This is the Indian Navy's first massive evacuation exercise from foreign soil during the COVID-19 lockdown. Full Article
dia Indian, Chinese troops clash in Sikkim sector By www.rediff.com Published On :: Sun, 10 May 2020 11:52:15 +0530 Many of them sustained minor injuries in the clash near Naku La in the Sikkim sector along the Sino-Indo border on Saturday Full Article
dia Happy Mother’s Day: Five iconic moms of Indian television By indianexpress.com Published On :: Sun, 10 May 2020 02:50:27 +0000 Full Article Entertainment Television
dia The Centre will need to nurse the Constitution and India back to good health By indianexpress.com Published On :: Sat, 09 May 2020 18:55:34 +0000 Full Article Columns Opinion
dia Indian women’s archery team to get final chance at Olympic quota in June next year By indianexpress.com Published On :: Sat, 09 May 2020 15:41:27 +0000 Full Article Sport Others Sports
dia Irfan Pathan, Suresh Raina rally for allowing Indian players in foreign T20 leagues By indianexpress.com Published On :: Sat, 09 May 2020 17:28:14 +0000 Full Article Cricket Sports
dia Fast identification of mineral inclusions in diamond at GSECARS using synchrotron X-ray microtomography, radiography and diffraction By scripts.iucr.org Published On :: 2019-07-19 Mineral inclusions in natural diamond are widely studied for the insight that they provide into the geochemistry and dynamics of the Earth's interior. A major challenge in achieving thorough yet high rates of analysis of mineral inclusions in diamond derives from the micrometre-scale of most inclusions, often requiring synchrotron radiation sources for diffraction. Centering microinclusions for diffraction with a highly focused synchrotron beam cannot be achieved optically because of the very high index of refraction of diamond. A fast, high-throughput method for identification of micromineral inclusions in diamond has been developed at the GeoSoilEnviro Center for Advanced Radiation Sources (GSECARS), Advanced Photon Source, Argonne National Laboratory, USA. Diamonds and their inclusions are imaged using synchrotron 3D computed X-ray microtomography on beamline 13-BM-D of GSECARS. The location of every inclusion is then pinpointed onto the coordinate system of the six-circle goniometer of the single-crystal diffractometer on beamline 13-BM-C. Because the bending magnet branch 13-BM is divided and delivered into 13-BM-C and 13-BM-D stations simultaneously, numerous diamonds can be examined during coordinated runs. The fast, high-throughput capability of the methodology is demonstrated by collecting 3D diffraction data on 53 diamond inclusions from Juína, Brazil, within a total of about 72 h of beam time. Full Article text
dia Linear array detector for online diagnostics of spectral distributions at MHz repetition rates By scripts.iucr.org Published On :: 2019-09-01 Free-electron lasers (FELs) based on superconducting accelerator technology and storage ring facilities operate with bunch repetition rates in the MHz range, and the need arises for bunch-by-bunch electron and photon diagnostics. For photon-pulse-resolved measurements of spectral distributions, fast one-dimensional profile monitors are required. The linear array detector KALYPSO (KArlsruhe Linear arraY detector for MHz-rePetition rate SpectrOscopy) has been developed for electron bunch or photon pulse synchronous read-out with frame rates of up to 2.7 MHz. At the FLASH facility at DESY, a current version of KALYPSO with 256 pixels has been installed at a grating spectrometer as online diagnostics to monitor the pulse-resolved spectra of the high-repetition-rate FEL pulses. Application-specific front-end electronics based on MicroTCA standard have been developed for data acquisition and processing. Continuous data read-out with low latency in the microsecond range enables the integration into fast feedback applications. In this paper, pulse-resolved FEL spectra recorded at 1.0 MHz repetition rate for various operation conditions at FLASH are presented, and the first application of an adaptive feedback for accelerator control based on photon beam diagnostics is demonstrated. Full Article text
dia X-ray radiation damage to biological samples: recent progress By scripts.iucr.org Published On :: 2019-07-01 With the continuing development of beamlines for macromolecular crystallography (MX) over the last few years providing ever higher X-ray flux densities, it has become even more important to be aware of the effects of radiation damage on the resulting structures. Nine papers in this issue cover a range of aspects related to the physics and chemistry of the manifestations of this damage, as observed in both MX and small-angle X-ray scattering (SAXS) on crystals, solutions and tissue samples. The reports include measurements of the heating caused by X-ray irradiation in ruby microcrystals, low-dose experiments examining damage rates as a function of incident X-ray energy up to 30 keV on a metallo-enzyme using a CdTe detector of high quantum efficiency as well as a theoretical analysis of the gains predicted in diffraction efficiency using these detectors, a SAXS examination of low-dose radiation exposure effects on the dissociation of a protein complex related to human health, theoretical calculations describing radiation chemistry pathways which aim to explain the specific structural damage widely observed in proteins, investigation of radiation-induced damage effects in a DNA crystal, a case study on a metallo-enzyme where structural movements thought to be mechanism related might actually be radiation-damage-induced changes, and finally a review describing what X-ray radiation-induced cysteine modifications can teach us about protein dynamics and catalysis. These papers, along with some other relevant literature published since the last Journal of Synchrotron Radiation Radiation Damage special issue in 2017, are briefly summarized below. Full Article text
dia An enlightening procedure to explain the extreme power of synchrotron radiation By scripts.iucr.org Published On :: 2019-10-10 A simple approach exploits quantum properties to justify the dependence on γ4 of the total synchrotron emitted power. It also clarifies some apparent puzzles and brings to light the underlying, multiple relativistic phenomena. Full Article text
dia White beam diagnostics using X-ray back-scattering from a CVD diamond vacuum window By scripts.iucr.org Published On :: 2020-01-01 Collecting back-scattered X-rays from vacuum windows using a pinhole X-ray camera provides an efficient and reliable method of measuring the beam shape and position of the white synchrotron beam. In this paper, measurements are presented that were conducted at ESRF beamline ID6 which uses an in-vacuum cryogenically cooled permanent-magnet undulator (CPMU18) and a traditional U32 undulator as its radiation sources, allowing tests to be performed at very high power density levels that were adjusted by changing the gap of the undulators. These measurements show that it is possible to record beam shape and beam position using a simple geometry without having to place any further items in the beam path. With this simple test setup it was possible to record the beam position with a root-mean-square noise figure of 150 nm. Full Article text
dia The HXD95: a modified Bassett-type hydrothermal diamond-anvil cell for in situ XRD experiments up to 5 GPa and 1300 K By scripts.iucr.org Published On :: 2020-01-29 A new diamond-anvil cell apparatus for in situ synchrotron X-ray diffraction measurements of liquids and glasses, at pressures from ambient to 5 GPa and temperatures from ambient to 1300 K, is reported. This portable setup enables in situ monitoring of the melting of complex compounds and the determination of the structure and properties of melts under moderately high pressure and high temperature conditions relevant to industrial processes and magmatic processes in the Earth's crust and shallow mantle. The device was constructed according to a modified Bassett-type hydrothermal diamond-anvil cell design with a large angular opening (θ = 95°). This paper reports the successful application of this device to record in situ synchrotron X-ray diffraction of liquid Ga and synthetic PbSiO3 glass to 1100 K and 3 GPa. Full Article text
dia IRIXS: a resonant inelastic X-ray scattering instrument dedicated to X-rays in the intermediate energy range By scripts.iucr.org Published On :: 2020-02-26 A new resonant inelastic X-ray scattering (RIXS) instrument has been constructed at beamline P01 of the PETRA III synchrotron. This instrument has been named IRIXS (intermediate X-ray energy RIXS) and is dedicated to X-rays in the tender-energy regime (2.5–3.5 keV). The range covers the L2,3 absorption edges of many of the 4d elements (Mo, Tc, Ru, Rh, Pd and Ag), offering a unique opportunity to study their low-energy magnetic and charge excitations. The IRIXS instrument is currently operating at the Ru L3-edge (2840 eV) but can be extended to the other 4d elements using the existing concept. The incoming photons are monochromated with a four-bounce Si(111) monochromator, while the energy analysis of the outgoing photons is performed by a diced spherical crystal analyzer featuring (102) lattice planes of quartz (SiO2). A total resolution of 100 meV (full width at half-maximum) has been achieved at the Ru L3-edge, a number that is in excellent agreement with ray-tracing simulations. Full Article text
dia Foreword to the special virtual issue dedicated to the proceedings of the PhotonDiag2018 workshop on FEL Photon Diagnostics, Instrumentation, and Beamlines Design By scripts.iucr.org Published On :: 2020-03-01 Full Article text
dia Earthquake strikes Sussex/Surrey border | Meridian - ITV News - ITV News By www.itv.com Published On :: Sat, 04 May 2019 07:00:00 GMT Earthquake strikes Sussex/Surrey border | Meridian - ITV News ITV News Full Article
dia Improving Britain’s geological mapping - The Guardian By www.theguardian.com Published On :: Wed, 27 Mar 2019 07:00:00 GMT Improving Britain’s geological mapping The Guardian Full Article
dia Lockdown has cut Britain's vibrations, seismologists find - The Guardian By www.theguardian.com Published On :: Mon, 06 Apr 2020 19:15:48 GMT Lockdown has cut Britain's vibrations, seismologists find The Guardian Full Article
dia Coronavirus: the week explained - 10 April - The Guardian By www.theguardian.com Published On :: Fri, 10 Apr 2020 11:11:36 GMT Coronavirus: the week explained - 10 April The Guardian Full Article
dia Scientists Explain Why Earth’s Magnetic North Pole Is Drifting Away From Canada Towards Siberia - Mashable India By in.mashable.com Published On :: Fri, 08 May 2020 13:10:00 GMT Scientists Explain Why Earth’s Magnetic North Pole Is Drifting Away From Canada Towards Siberia Mashable India Full Article
dia Explained: How coronavirus lockdown reduced Earth’s seismic noise levels - The Indian Express By indianexpress.com Published On :: Sun, 12 Apr 2020 18:31:06 GMT Explained: How coronavirus lockdown reduced Earth’s seismic noise levels The Indian Express Full Article
dia Scaling diffraction data in the DIALS software package: algorithms and new approaches for multi-crystal scaling By journals.iucr.org Published On :: A new scaling program is presented with new features to support multi-sweep workflows and analysis within the DIALS software package. Full Article text
dia 5-(3-Hydroxyphenyl)-1,3,4-oxadiazole-2(3H)-thione hemihydrate By scripts.iucr.org Published On :: 2019-11-15 The title 1,3,4-oxadiazole derivative crystallizes as a hemihydrate, C8H6N2O2S·0.5H2O, with the water molecule located on a twofold rotation axis. The 1,3,4-oxadiazole molecule is essentially planar, the r.m.s. deviation of the non-H atoms being 0.0443 Å. The dihedral angle between the mean planes of the phenyl and oxadiazole rings is 6.101 (17)°. In the crystal, molecules are linked via O—H⋯S and N—H⋯O hydrogen bonds involving the water molecule, the N—H group and the thione S atom into undulating ribbons. Additional π–π interactions generate a two-dimensional supramolecular framework extending parallel to (001). Full Article text
dia Benzene-1,2-diaminium bis(4-methylbenzene-1-sulfonate) By scripts.iucr.org Published On :: 2020-01-31 The structure of the title salt, C6H10N22+·2C7H7O3S−, consists of a unique benzene-1,2-diaminium dication charge balanced by a pair of crystallographically independent 4-methylbenzene-1-sulfonate anions. The cations and anions are interlinked by several N—H⋯O hydrogen bonds. Full Article text
dia Diaquatetrakis(μ-3-methoxybenzoato-κ2O1:O1')dicopper(II) By scripts.iucr.org Published On :: 2020-04-07 The asymmetric unit of the binuclear title compound, [Cu2(C8H7O3)4(H2O)2], comprises two halves of diaquatetrakis(μ-3-methoxybenzoato-κ2O1:O1')dicopper(II) units. The paddle-wheel structure of each complex is completed by application of inversion symmetry, with the inversion centre situated at the midpoint between two CuII atoms in each dimer. The two CuII atoms of each centrosymmetric dimer are bridged by four 3-methoxybenzoate anions resulting in Cu⋯Cu separations of 2.5961 (11) and 2.6060 (12) Å, respectively. The square-pyramidal coordination sphere of each CuII atom is completed by an apical water molecule. Intermolecular O—H⋯O hydrogen bonds of weak nature link the complexes into layers parallel to (100). The three-dimensional network structure is accomplished by C—H⋯O hydrogen bonds interlinking adjacent layers. Full Article text
dia 5-MeO-DALT: the freebase of N,N-diallyl-5-methoxytryptamine By scripts.iucr.org Published On :: 2020-04-17 The title compound {systematic name: N-[2-(5-methoxy-1H-indol-3-yl)ethyl]-N-(prop-2-en-1-yl)prop-2-en-1-amine), C17H22N2O, has a single tryptamine molecule in the asymmetric unit. The molecules are linked by strong N—H⋯N hydrogen bonds into zigzag chains with graph-set notation C(7) along the [010] direction. Full Article text
dia Crystal structure of 3,14-diethyl-2,13-diaza-6,17-diazoniatricyclo[16.4.0.07,12]docosane dinitrate dihydrate from synchrotron X-ray data By scripts.iucr.org Published On :: 2019-05-31 The crystal structure of title salt, C22H46N42+·2NO3−·2H2O, has been determined using synchrotron radiation at 220 K. The structure determination reveals that protonation has occurred at diagonally opposite amine N atoms. The asymmetric unit contains half a centrosymmetric dication, one nitrate anion and one water molecule. The molecular dication, C22H46N42+, together with the nitrate anion and hydrate water molecule are involved in an extensive range of hydrogen bonds. The molecule is stabilized, as is the conformation of the dication, by forming intermolecular N—H⋯O, O—H⋯O, together with intramolecular N—H⋯N hydrogen bonds. Full Article text
dia Crystal structure, spectroscopic characterization and Hirshfeld surface analysis of trans-diaqua[2,5-bis(pyridin-4-yl)-1,3,4-oxadiazole]dithiocyanatonickel(II) By scripts.iucr.org Published On :: 2019-06-21 The reaction of 2,5-bis(pyridin-4-yl)-1,3,4-oxadiazole (4-pox) and thiocyanate ions, used as co-ligand with nickel salt NiCl2·6H2O, produced the title complex, [Ni(NCS)2(C12H8N4O)2(H2O)2]. The NiII atom is located on an inversion centre and is octahedrally coordinated by four N atoms from two ligands and two pseudohalide ions, forming the equatorial plane. The axial positions are occupied by two O atoms of coordinated water molecules. In the crystal, the molecules are linked into a three-dimensional network through strong O—H⋯N hydrogen bonds. Hirshfeld surface analysis was used to investigate the intermolecular interactions in the crystal packing. Full Article text
dia (E)-6,6'-(Diazene-1,2-diyl)bis(1,10-phenanthrolin-5-ol) trichloromethane disolvate: a superconjugated ligand By scripts.iucr.org Published On :: 2019-07-23 Phenanthroline ligands are important metal-binding molecules which have been extensively researched for applications in both material science and medicinal chemistry. Azobenzene and its derivatives have received significant attention because of their ability to be reversibly switched between the E and Z forms and so could have applications in optical memory and logic devices or as molecular machines. Herein we report the formation and crystal structure of a highly unusual novel diazo-diphenanthroline compound, C24H14N6O2·2CHCl3. Full Article text
dia Crystal structure and Hirshfeld surface analysis of (E)-4-{[2,2-dichloro-1-(4-methoxyphenyl)ethenyl]diazenyl}benzonitrile By scripts.iucr.org Published On :: 2019-07-16 In the title compound, C16H11Cl2N3O, the 4-methoxy-substituted benzene ring makes a dihedral angle of 41.86 (9)° with the benzene ring of the benzonitrile group. In the crystal, molecules are linked into layers parallel to (020) by C—H⋯O contacts and face-to-face π–π stacking interactions [centroid–centroid distances = 3.9116 (14) and 3.9118 (14) Å] between symmetry-related aromatic rings along the a-axis direction. A Hirshfeld surface analysis indicates that the most important contributions to the crystal packing are from Cl⋯H/H⋯Cl (22.8%), H⋯H (21.4%), N⋯H/H⋯N (16.1%), C⋯H/H⋯C (14.7%) and C⋯C (9.1%) interactions. Full Article text
dia Crystal structures and Hirshfeld surface analyses of the two isotypic compounds (E)-1-(4-bromophenyl)-2-[2,2-dichloro-1-(4-nitrophenyl)ethenyl]diazene and (E)-1-(4-chlorophenyl)-2-[2,2-dichloro-1-(4-ni By scripts.iucr.org Published On :: 2019-07-19 In the two isotypic title compounds, C14H8BrCl2N3O2, (I), and C14H8Cl3N3O2, (II), the substitution of one of the phenyl rings is different [Br for (I) and Cl for (II)]. Aromatic rings form dihedral angles of 60.9 (2) and 64.1 (2)°, respectively. Molecules are linked through weak X⋯Cl contacts [X = Br for (I) and Cl for (II)], C—H⋯Cl and C—Cl⋯π interactions into sheets parallel to the ab plane. Additional van der Waals interactions consolidate the three-dimensional packing. Hirshfeld surface analysis of the crystal structures indicates that the most important contributions for the crystal packing for (I) are from C⋯H/H⋯C (16.1%), O⋯H/H⋯O (13.1%), Cl⋯H/H⋯Cl (12.7%), H⋯H (11.4%), Br⋯H/H⋯Br (8.9%), N⋯H/H⋯N (6.9%) and Cl⋯C/C⋯Cl (6.6%) interactions, and for (II), from Cl⋯H / H⋯Cl (21.9%), C⋯H/H⋯C (15.3%), O⋯H/H⋯O (13.4%), H⋯H (11.5%), Cl⋯C/C⋯Cl (8.3%), N⋯H/H⋯N (7.0%) and Cl⋯Cl (5.9%) interactions. The crystal of (I) studied was refined as an inversion twin, the ratio of components being 0.9917 (12):0.0083 (12). Full Article text
dia Crystal structure of tetra-μ-acetato-bis[(5-amino-2-methylsulfanyl-1,3,4-thiadiazole-κN1)copper(II)] By scripts.iucr.org Published On :: 2019-07-23 The reaction of 2-methylthio-5-amino-1,3,4-thiadiazole (Me-SNTD; C3H5N3S2) with copper(II) acetate monohydrate [Cu(OAc)2·H2O; C4H8CuO5] resulted in the formation of the title binuclear compound, [Cu2(C2H3O2)4(C3H5N3S2)2] or [Cu2(OAc)4(Me-SNTD)2]. The structure has triclinic (P overline{1}) symmetry with a crystallographic inversion centre located at the midpoint of the line connecting the Cu atoms in the dimer. These two Cu atoms of the dimer [Cu⋯Cu = 2.6727 (6) Å] are held together by four carboxylate groups. Each Cu atom is further coordinated to the N atom of an Me-SNTD molecule and exhibits a Jahn–Teller-distorted octahedral geometry. The dimers are connected into infinite chains by hydrogen bonds between the NH (Me-SNTD) and the carboxylate groups of neighbouring molecules, generating an R22(12) ring motif. The molecules are further linked by C—H⋯π interactions between the thiadiazole rings and the methyl groups of the acetate units. Full Article text
dia The crystal structures and Hirshfeld surface analyses of four 3,5-diacetyl-2-methyl-2,3-dihydro-1,3,4-thiadiazol-2-yl derivatives By scripts.iucr.org Published On :: 2019-09-10 The title compounds, 4-(5-acetamido-3-acetyl-2-methyl-2,3-dihydro-1,3,4-thiadiazol-2-yl)phenyl benzoate, C20H19N3O4S (I), 4-(5-acetamido-3-acetyl-2-methyl-2,3-dihydro-1,3,4-thiadiazol-2-yl)phenyl isobutyrate 0.25-hydrate, C17H21N3O4S·0.25H2O (II), 4-(5-acetamido-3-acetyl-2-methyl-2,3-dihydro-1,3,4-thiadiazol-2-yl)phenyl propionate, C16H19N3O4S (III) and 4-(5-acetamido-3-acetyl-2-methyl-2,3-dihydro-1,3,4-thiadiazol-2-yl)phenyl cinnamate chloroform hemisolvate, C22H21N3O4S·0.5CHCl3 (IV), all crystallize with two independent molecules (A and B) in the asymmetric unit in the triclinic Poverline{1} space group. Compound II crystallizes as a quaterhydrate, while compound IV crystallizes as a chloroform hemisolvate. In compounds I, II, III (molecules A and B) and IV (molecule A) the five-membered thiadiazole ring adopts an envelope conformation, with the tetrasubstituted C atom as the flap. In molecule B of IV this ring is flat (r.m.s. deviation 0.044 Å). The central benzene ring is in general almost normal to the mean plane of the thiadiazole ring in each molecule, with dihedral angles ranging from 75.8 (1) to 85.5 (2)°. In the crystals of all four compounds, the A and B molecules are linked via strong N—H⋯O hydrogen bonds and generate centrosymmetric four-membered R44(28) ring motifs. There are C—H⋯O hydrogen bonds present in the crystals of all four compounds, and in I and II there are also C—H⋯π interactions present. The intermolecular contacts in the crystals of all four compounds were analysed using Hirshfeld surface analysis and two-dimensional fingerprint plots. Full Article text
dia Different packing motifs mediated by weak interactions and polymorphism in the crystal structures of five 2-(benzylidene)benzosuberone derivatives By scripts.iucr.org Published On :: 2019-10-29 The syntheses and crystal structures of five 2-benzylidene-1-benzosuberone [1-benzosuberone is 6,7,8,9-tetrahydro-5H-benzo[7]annulen-5-one] derivatives, viz. 2-(4-methoxybenzylidene)-1-benzosuberone, C19H18O2, (I), 2-(4-ethoxybenzylidene)-1-benzosuberone, C20H20O2, (II), 2-(4-benzylbenzylidene)-1-benzosuberone, C25H22O2, (III), 2-(4-chlorobenzylidene)-1-benzosuberone, C18H15ClO, (IV) and 2-(4-cyanobenzylidene)-1-benzosuberone, C19H15NO, (V), are described. The conformations of the benzosuberone fused six- plus seven-membered ring fragments are very similar in each case, but the dihedral angles between the fused benzene ring and the pendant benzene ring differ somewhat, with values of 23.79 (3) for (I), 24.60 (4) for (II), 33.72 (4) for (III), 29.93 (8) for (IV) and 21.81 (7)° for (V). Key features of the packing include pairwise C—H⋯O hydrogen bonds for (II) and (IV), and pairwise C—H⋯N hydrogen bonds for (V), which generate inversion dimers in each case. The packing for (I) and (III) feature C—H⋯O hydrogen bonds, which lead to [010] and [100] chains, respectively. Weak C—H⋯π interactions consolidate the structures and weak aromatic π–π stacking is seen in (II) [centroid–centroid separation = 3.8414 (7) Å] and (III) [3.9475 (7) Å]. A polymorph of (I) crystallized from a different solvent has been reported previously [Dimmock et al. (1999) J. Med. Chem. 42, 1358–1366] in the same space group but with a packing motif based on inversion dimers resembling that seen in (IV) in the present study. The Hirshfeld surfaces and fingerprint plots for (I) and its polymorph are compared and structural features of the 2-benzylidene-1-benzosuberone family of phases are surveyed. Full Article text
dia Synthesis and crystal structure of (E)-1,2-bis[2-(methylsulfanyl)phenyl]diazene By scripts.iucr.org Published On :: 2019-10-31 The title compound, C14H14N2S2, was obtained by transmetallation of 2,2'-bis(trimethylstannyl)azobenzene with methyl lithium, and subsequent quenching with dimethyl disulfide. The asymmetric unit comprises two half-molecules, the other halves being completed by inversion symmetry at the midpoint of the azo group. The two molecules show only slight differences with respect to N=N, S—N and aromatic C=C bonds or angles. Hirshfeld surface analysis reveals that except for one weak H⋯S interaction, intermolecular interactions are dominated by van der Waals forces only. Full Article text
dia Crystal structure, Hirshfeld surface analysis and interaction energy and DFT studies of 1-methyl-3-(prop-2-yn-1-yl)-2,3-dihydro-1H-1,3-benzodiazol-2-one By scripts.iucr.org Published On :: 2019-11-29 In the title molecule, C11H10N2O, the dihydrobenzimidazol-2-one moiety is essentially planar, with the prop-2-yn-1-yl substituent rotated well out of this plane. In the crystal, C—HMthy⋯π(ring) interactions and C—HProp⋯ODhyr (Mthy = methyl, Prop = prop-2-yn-1-yl and Dhyr = dihydro) hydrogen bonds form corrugated layers parallel to (10overline{1}), which are associated through additional C—HBnz⋯ODhyr (Bnz = benzene) hydrogen bonds and head-to-tail, slipped, π-stacking [centroid-to-centroid distance = 3.7712 (7) Å] interactions between dihydrobenzimidazol-2-one moieties. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions to the crystal packing are from H⋯H (44.1%), H⋯C/C⋯H (33.5%) and O⋯H/H⋯O (13.4%) interactions. Hydrogen-bonding and van der Waals interactions are the dominant interactions in the crystal packing. Computational chemistry calculations indicate that in the crystal, C—H⋯O hydrogen-bond energies are 46.8 and 32.5 (for C—HProp⋯ODhyr) and 20.2 (for C—HBnz⋯ODhyr) kJ mol−1. Density functional theory (DFT) optimized structures at the B3LYP/6–311 G(d,p) level are compared with the experimentally determined molecular structure in the solid state. The HOMO–LUMO behaviour was elucidated to determine the energy gap. Full Article text
dia Crystal structure, Hirshfeld analysis and a molecular docking study of a new inhibitor of the Hepatitis B virus (HBV): ethyl 5-methyl-1,1-dioxo-2-{[5-(pentan-3-yl)-1,2,4-oxadiazol-3-yl]methyl}-2H-1,2,6-thiadiazine-4-carboxyla By scripts.iucr.org Published On :: 2020-01-01 The title compound, C15H22N4O5S, was prepared via alkylation of 3-(chloromethyl)-5-(pentan-3-yl)-1,2,4-oxadiazole in anhydrous dioxane in the presence of triethylamine. The thiadiazine ring has an envelope conformation with the S atom displaced by 0.4883 (6) Å from the mean plane through the other five atoms. The planar 1,2,4-oxadiazole ring is inclined to the mean plane of the thiadiazine ring by 77.45 (11)°. In the crystal, molecules are linked by C—H⋯N hydrogen bonds, forming chains propagating along the b-axis direction. Hirshfeld surface analysis and two-dimensional fingerprint plots have been used to analyse the intermolecular contacts present in the crystal. Molecular docking studies were use to evaluate the title compound as a potential system that interacts effectively with the capsid of the Hepatitis B virus (HBV), supported by an experimental in vitro HBV replication model. Full Article text