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Save the dates for the EU BON biodiversity data sharing and data publishing workshop

Are you in Eastern Europe and actively involved in monitoring and managing biodiversity data? Then the EU BON "Biodiversity data sharing and data publishing workshop" might just be the thing for you.

The event will take place on 22-23 March 2016 in Sofia, Bulgaria with focus on publishing of biodiversity data, in particular species occurrences, sample-based and citizen science data. The training will include a practical session during which participants will be assisted by experienced trainers from the EU BON project. To register and for more information, click here.

The sessions on data sharing will cover introductory overview of key concepts, demonstration and practical exercise using the GBIF Integrated Publishing Toolkit (IPT). The Global Biodiversity Information Facility (GBIF) is the world's largest initiative for enabling free access to biodiversity data via internet.

Special attention will be paid to data paper publishing led by specialists from Pensoft Publishers - a company well known among biodiversity scientists worldwide for technologically cutting-edge open access journals, such as: Research Ideas and Outcomes, ZooKeys, Biodiversity Data Journal, Nature Conservation, and a strong advocate of data publishing. Registration of data in GEO registry system will be also addressed during the workshop.

The following topics will be covered (detailed program will follow):

  • The data publishing landscape, gaps and mobilization efforts
  • Demonstration and practical session on data publishing using the GBIF IPT: step-by-step demo will show in detail (and in practice) how to publish a dataset using IPT.
  • The Data Publishing Toolkit at EU BON: Automated creation of data papers, data and text integrated publishing via the ARPHA Publishing Platform
  • Citizen Science gateway and demo of PlutoF Citizen Science module
  • GoldenGate Imagine tool and copyright issues
  • Registration of data in the GEO Registry System

Context and background: 

Addressing global problems, such as biodiversity loss and impacts of climate change requires open access to data. This was concluded by world leaders at Johannesburg Summit in 2002 when they established the Group for Earth Observations (GEO). EU BON (Building the European Biodiversity Observation Network) seeks to enhance biodiversity data availability and integration, and is the European contribution to the GEO Biodiversity Observation Network.

All biodiversity databases need to be integrated in GEO. Therefore, EU BON undertakes capacity building of biodiversity communities (e.g. researchers, citizen scientists, non-governmental organisations) that are involved in collecting and disseminating biodiversity information, including monitoring initiatives.

To register and for more information, click here.

 

 





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PhD Offer: monioring biodiversity variables from satellite remote sensing using artificial intelligence methods

The Faculty of Geo-Information Science and Earth Observation (ITC) at the University of Twente has recently launched an investment programme to strengthen its international academic fields. For 11 pioneering-multidisciplinairy projects a PhD-position is made available, three of them already are filled in. The Department of Natural Resources (NRS) specialises in advanced spatial and temporal analysis and technique development for the environment as well as sustainable agriculture.

Job Description: 

The aim of this PhD project is to develop a cloud based artificial neural network for processing large remotely sensed data sets in order to generate essential biodiversity variables (as defined by Pereira et al. (2013) and Skidmore et al. (2015)). The PhD candidate, in combination with supervisors and programming support, will develop innovative artificial intelligence techniques for estimating biodiversity variables using massive cloud based data sets of satellite remotely sensed, in situ and ancillary data. Potential candidate biodiversity variables to be retrieved from satellite remote sensing include pertinent indicators of ecosystem function, ecosystem structure and species traits. The research will result in a PhD thesis.

For more information visit the official job offer.





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Interview: Clint Alibrandi from REDIAM on the benefits of an European Biodiversity Portal

One of the main outputs of EU BON will be the establishment of an European Biodiversity Portal based on data collected and compiled from a variety of sources including earth observations but also observations and monitoring data from (local) sites. One of the main points of this portal is to serve as a substantial building block of a global biodiversity portal planned by the Group of Earth Observations project GEO BON.

But how will this portal be useful to stakeholders on a more local level - for example for people involved in questions connected to biodiversity across European regions? What will be the real benefits of it for biodiversity monitoring and conservation? Just a couple of weeks after the Third EU BON Stakeholder Round Table in Granada, Spain, Mr Clint Alibrandi from REDIAM (Environment and Water Agency in Andalusia) gives us his views on these questions.


Picture:  Excursion to Sierra Nevada.; Credit: Katrin Vohland

Q: REDIAM shares a mission with EU BON in its attempt to collect, standardize and distribute available biodiversity data. What will be the expected benefits and challenges in the process of making this type of datasets available for society and environmental policy?

A: Among the responsibilities of the Regional Environmental Government of Andalusia are promoting Social Environmental Awareness, Managing a vast, diverse and very complex territory, Control and Mitigate any threats posed to the fragile ecosystems present in our region as well as all the responsibilities derived from the management and planning of the existing natural resources.

Considering these facts, it is necessary to be able to account for the best environmental information available. Since the early 80’s the Regional Environmental Government of Andalusia has been working on its Environmental Information System with the purpose of generating, compiling, standardizing and analyzing Environmental Information covering topics such as Climate, Water, Air Quality and Biodiversity by means of ICTs. This the REDIAM. The name comes from the Spanish Acronym "REd De Información AMbiental de Andalucía" which means the Environmental Information Network of Andalusia. It serves as a Unified Regional Environmental Information Registry.

From this effort, the information obtained by the REDIAM is made publicly available to be then employed in Decision Making processes and Management Planning on behalf of the Administrations, for Dissemination and Awareness as well as for Research purposes.

As such, it is of vital importance for the REDIAM to be able to account for updated and verifiable Information and Data Sources and this is what we consider to be the most important benefit on behalf of EU BON, as it will offer the possibility to have a higher level reference covering a larger perspective, allowing stakeholders, be it either from a local, regional or national level, to consult or work with data, tools and have reference to relevant policies concerning Biodiversity on the European scale in order to be able to better transpose them to a more local context.

Yet the greatest challenge we believe that EU BON might come to face is the fact that the different contexts that exist over the whole European territory make it very difficult to tailor tools and information formats which can cover the different priorities or needs that exist in the diverse makeup of stakeholders that exist from a local, regional and national perspective. The same can most probably apply to the feedback, queries or requests made to EU BON on behalf of the stakeholder and user community. It is never easy to reach a common base level and from the regional perspective, REDIAM has faced the same type of situations.

Q: What type of stakeholders do you hope to engage through your network - who is using your data and for what purposes?

A: The stakeholders which are currently engaged with the REDIAM consist in Universities, Research Centres, Public Bodies, Local Administrations, Private Companies just to name a few examples. There are over 150 organizations which are partners of the REDIAM, they provide relevant Environmental Information to the REDIAM and are responsible for updating the information.

And as can be expected,the information provided is as diverse as the makeup of stakeholders that are part of the REDIAM, with the following formats being made available: Cartography, Satellites Images, Databases, Reports, Statistics, Applications, Management Plans and Programmes, Orthophotos, Indicators, Studies.

Additionally the REDIAM offers the user community different alternatives in order to access the previously indicated information. The REDIAM Channel is a web portal with a Catalogue and Information Search System, OGC Services, Query and Viewer tools, Downloader. The user community is able to access its information and services. This community consists in Citizens, Universities, Public Administrations and Companies from the Public and Private Sector.

Q: Where do you see the cross section between REDIAM’s work and EU BON - what are the products from EU BON and other European projects that would be helpful for the work that you are doing?

A: The REDIAM has great interest in the following issues and we believe that EU BON would be up to the task of providing solutions and/or guidelines on how to be able to proceed to solve them:

  • The elaboration of a common tool for the description and localization of species throughout the European Territory. This can prove a very useful service for Environmental Impact Assessments by providing a more complete view on different species distribution on determined area.
  • Defining a standardized list of species which contains the taxonomically correct name for each one of them. EU BON could serve as a base reference to set guidelines for standardizing the taxonomical classification of species.
  • Support and guidance in defining specific biodiversity indicators as proposed by EUROSTAT, a methodological and assessment guide of some sort.

Q: In your opinion what are the three greatest benefits of a European level biodiversity portal?

A: 1) Offering an opportunity of Standardizing and Harmonizing Biodiversity related information. We all speak the same "language" when referring to Biodiversity, but it is necessary that we all be able to follow the same "rules" as well. This is the first and most important pillar we believe that a European level Biodiversity portal can bring into play.

2) It would allow for and facilitate a widespread exchange of information amongst stakeholders throughout the whole European Territory.

3) And finally, it would allow a common analysis on a European level which would provide a general assessment on how different efforts and policies are effective, value which is the real status of Biodiversity and/or specific species independently from the limit of administrative or country borders.

About REDIAM:

The Environmental Information Network REDIAM has onboard experts from the Regional Ministry of Environment in Andalusia and its Water and Environmental Agency. With a team expertise ranging from local to regional and European level and from technical know-how to regional and thematic assessment, the main aim of the network is to integrate all spatially-referenced biodiversity data produced in Andalusia. Raw data are used to generate knowledge and improve its distribution, making it accessible and comprehensible for the general public.





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How to argue for biodiversity conservation: 2 guides

Recommendations from the FP7-funded EU project BESAFE

Biodiversity decline is a fact, but how can society be convinced of the benefits of biodiversity for human well being and of the necessity of further protective action? The FP7 funded EU project Biodiversity and Ecosystem Services: Arguments for our Future Environment (BESAFE) addressed this challenge to produce guidance that can help improve the way we use arguments for conservation and convincingly demonstrate the value of biodiversity to decision-makers.


Credit: Rob Bugter

Two key outputs of the project are the final brochure "How to Argue for Biodiversity Conservation More Effectively: Recommendations from the BESAFE project", including key conclusions from project publications and case studies, and an interactive online tool, which can lead stakeholders to the relevant information in a few mouse clicks.

Key recommendations of BESAFE featured in these resources are:

  • The success of a more integrated approach depends on stakeholder engagement. A top-down policy framework that sets goals for the protection of particular sites and species is important, but it is not enough to prevent biodiversity loss. - -- An integrated approach, seeking to 'mainstream' biodiversity concerns across all policy sectors (e.g. agriculture, forestry, water, energy, transport and urban planning) is needed.
  • Promote bottom-up initiatives at the local level. All stakeholders need to be actively involved in the decision-making process, which should facilitate building trust and working towards generally agreed and accepted solutions.
  • Tailor arguments to the audience. Arguments need to be framed to fit the values and goals of the audience, embracing the plurality of values attached to nature, and using appropriate language. For example, over-emphasising economic arguments could alienate people who are motivated mainly by ethical and moral concerns.
  • Use positive arguments. Positive framing of arguments to emphasise benefits is often more powerful than negative framing that focuses on threats and losses. The concept of ecosystem services is useful for emphasising positive benefits, provided that it is properly explained to stakeholders.
  • Use a wider range of arguments. Arguments based on the economic value of nature for humans dominate European and national policy-making, and are often seen as central to gaining high-level policy-maker support, but our results show that many decision-makers and other stakeholders also use and respond positively to ethical and moral arguments.

"We aimed to provide the essence of 4 years worth of research in an easy to read and reuse form, to maximise the potential of using the right arguments for conservation at the right time in order to successfully demonstrate the value of biodiversity to decision-makers," comments Rob Bugter, co-ordinator of the BESAFE project.

Try out the resources below:

Bugter R., Smith A.C. and the BESAFE consortium. 2015. How to argue for biodiversity conservation more effectively. Recommendations from the BESAFE project. Pensoft Publishers, Sofia, 26 pp. Available at: http://www.besafe-project.net/img/uplf/BESAFE_brochure_online_18.pdf

BESAFE web tool available at: http://tool.besafe-project.net/





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Shaping the EU BON Biodiversity Portal

From 26 to 28 January 2016, EU BON hosted its first Biodiversity Portal Hackathon in Seville, Spain. The event marked an important milestone for the project, paving the way towards one of the most important EU BON products - the European Biodiversity Portal.

It is a well known fact that current biodiversity observation systems and environmental datasets are unbalanced in coverage and not well integrated. This brings the need of a new system which will facilitate access to such knowledge and will effectively improve the work in the field of biodiversity observation in general.


Participants at the Biodiversity Portal Hackathon in Seville, Spain; Credit: Pensoft

The ultimate goal of EU BON is to create an European Biodiversity Portal which will collect and present biodiversity data from across Europe in a consistent and re-usable way. The portal will then feed into a global equivalent developed by the Group on Earth Observation’s Biodiversity Observation Network (GEO BON).

But what are the benefits from and what are the challenges in front of such an ambitious project?

Following the Biodiversity Data Portal hackathon, Dr. Hannu Saarenmaa, leader of WP 2 Data integration and interoperability, and Juan José Negro answered these questions in a video interview: 





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We’ve been busy: EU BON discusses its Biodiversity Portal prototype & strategies for focused biodiversity data mobilization

April proved to be an eventful month for EU BON, hosting the presentation of two major project results, not only within the same month, but in the course of one week. While CSIC and partners were launching the beta-version of the long-waited Biodiversity Portal in Seville, another EU BON team was busy to search for Integrated approaches for focused biodiversity data mobilization in Stockholm.

About the Portal:

In a dedicated session at the WP2 meeting in Seville, Spain, EU BON partners had the chance to view their work for the last couple of years materialising into one of the main expected project results - the European Biodiversity Portal. That said, what was then presented on 29 April is a beta version, with the final release of the portal planned to become available in early 2017.

Participants at the Seville Workshop, April 2016. Credit: A. Hoffmann

Nonetheless, this beta version already addresses the main aim to offer a unique service for analysing and understanding biodiversity change in Europe. For instance, users can explore how relative abundance of species (within a larger group) changes over time by using big data mediated by GBIF. There is also a spatial browser for locating datasets in any part of the world, which may be usable for computing the EBVs for species populations.

Additionally, an online analytical data processing (OLAP) toolbox has been included in this release. Based on GEOSS technology, the new portal lets users harvest and simultaneously access data from several directories, including GBIF, LTER, EuMon (coming), PESI, and GEOSS sources.

This release also highlights the products of the EU BON project, including new methods and analyses packed in factsheets and infographics for the convenience of scientists and policy users alike. Explore the portal’s beta version here.

Suggestions of how to develop the beta portal further towards the full release are appreciated. Use the feedback form at the welcome page.

Integrated biodiversity data mobilization:

It is a challenge for Bioinformatics group in Europe and around the world to find better ways to integrate different systems and technology. In EU BON’s Task 1.4 the approach to solving this issue was to integrate different systems managing natural history collections and molecular data systems using the best techniques available.

In a dedicated workshop, which took place in Stockholm, Sweden, developers in the sphere of bioinformatics were presented with the project’s Data Mobilization Toolkit. This particular workshop was mainly focused on Docker as a tool to move towards a more integrated environment. Docker has revolutionized system integration and in the workshop the Swedish team shared their experience with dockerizing the DINA-system.

Discussions during the Stockholm workshop; Credit: Karin Karlsson

The workshop ended with a hackathon where they together explored the possibilities for using Docker in selected parts of integrating Pluto-F, JACQ and DINA.

 





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Sharing biodiversity data: EU BON recommended tools and practices published in RIO Journal

Due to the exponential growth of biodiversity information in recent years, the questions of how to mobilize such vast amounts of data has become more tangible than ever. Best practices for data sharing, data publishing, and involvement of scientific and citizen communities in data generation are the main topic of a recent report by the EU FP7 project Building the European Biodiversity Observation Network (EU BON), published in the innovative Research Ideas & Outcomes (RIO) journal.

The report "Data sharing tools for Biodiversity Observation Networks" provides conceptual and practical advice for implementation of the available data sharing and data publishing tools. A detailed description of tools, their pros and cons, is followed by recommendations on their deployment and enhancement to guide biodiversity data managers in their choices.

"We believe publishing this report in RIO makes a lot of sense given the journal's innovative concept of publishing unconventional research outcomes such as project reports. This feature provides projects like EU BON with the chance to showcase their results effectively and timely. The report provides a useful practical guide for biodiversity data managers and RIO gives the project an opportunity to share findings with anyone who will make use of such information", explains Prof. Lyubomir Penev, Managing Director of Pensoft and partner in EU BON.

The new report is the second EU BON contribution featured in a dedicated project outcomes collection in RIO. Together with the data policy recommendations it provides a comprehensive set of resources for the use of biodiversity data managers and users.

"We did our biodiversity data sharing tools comparison from the perspective of the needs of the biodiversity observation community with an eye on the development of a unified user interface to this data - the European Biodiversity Portal (EBP)", add the authors.

The scientists have identified two main challenges standing in front of the biodiversity data community. On the one hand, there is a variety of tools but none can as stand alone, satisfy all the requirements of the wide variety of data providers. On the other hand, gaps in data coverage and quality demand more effort in data mobilization.

"For the time being a combination of tools combined in a new work-flow, makes the most sense for EU BON to mobilize biodiversity data," comment the report authors on their findings. "There is more research to be done and tools to be developed, but for the future there is one firm conclusion and it is that the choice of tools should be defined by the needs of those observing biodiversity - the end user community in the broadest sense - from volunteer scientists to decision makers."

Original Source:

Smirnova L, Mergen P, Groom Q, De Wever A, Penev L, Stoev P, Pe'er I, Runnel V, Camacho A, Vincent T, Agosti D, Arvanitidis C, Bonet F, Saarenmaa H (2016) Data sharing tools adopted by the European Biodiversity Observation Network Project. Research Ideas and Outcomes 2: e9390. doi: 10.3897/rio.2.e9390





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A new Biodiversity Portal for Europe to enhance access to monitoring data

Set to compile the largest biodiversity data collection for Europe to date, the EU-funded FP7 project Building the European Biodiversity Observation Network (EU BON) has now launched the beta-version of its European Biodiversity Portal.

Despite being a beta version, this release already addresses the main aim to offer a unique service for analysing and understanding biodiversity change in Europe. For instance, users can explore how relative abundance of species (within a larger group) changes over time by using big data mediated by GBIF. There is also a spatial browser for locating datasets in any part of the world, which may be usable for computing the EBVs for species populations.

Additionally, an online analytical data processing (OLAP) toolbox has been included in this release. Based on GEOSS technology, the new portal lets users harvest and simultaneously access data from several directories, including GBIF, LTER, EuMon (coming), PESI, and GEOSS sources.

Started in 2012, the five-year project EU BON has been working towards building this new European Biodiversity Portal where scattered and various information and tools are collected, highlighted and widely shared for future research.

The service will provide all interested parties with a professional database platform with a large amount of implications. For example, coordinators can receive information about related monitoring programs in different countries. Initiatives could integrate their data and compare the trends and status across different countries and regions.

"The ultimate goal of EU BON is to build a comprehensive European Biodiversity Portal that will then feed into a Global Portal currently developed by GEO BON. This initiative will provide a completely new holistic way for analyzing global trends and processes.", concludes Dr. Hannu Saarenmaa, University of Eastern Finland and Work Package leader in EU BON.

We invite everyone to test the new portal and send us their feedback and suggestions for improvements via our Feedback Form.

 





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Online consultation to fill gaps in the global indicator framework for the Aichi Biodiversity Targets

The Biodiversity Indicators Partnership (BIP) Secretariat is looking for indicators to fill gaps in the global suite of biodiversity indicators and allow a full understanding of progress towards globally agreed targets.

They are inviting experts and organisations to participate in an open online consultation to fill the gaps in the global indicator framework for the Strategic Plan for Biodiversity 2011-2020. Through this short online survey they want to hear about any existing indicators (both global and sub-global in scale), indicators under development, potentially useful datasets or key experts or organisations in the fields. The main focus is on indicators that respond to the gaps in the global framework, which are listed on the attached flyer, but they are also keen to hear about any other indicators that could potentially enhance the existing indicator suite.

The consultation is open until 30 June 2016. Further information on the consultation is available in the attached flyer, the BIP website http://www.bipindicators.net/gaps, and the CBD notification SCBD/OES/RH/KNM/85710.





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Article Alert:Biodiversity scenarios neglect future land-use changes

A new opinion piece published in the journal Global Change Biology looks at the development of biodiversity scenarios and their inclusion of  future land-use changes.

Abstract: 

Efficient management of biodiversity requires a forward-looking approach based on scenarios that explore biodiversity changes under future environmental conditions. A number of ecological models have been proposed over the last decades to develop these biodiversity scenarios. Novel modelling approaches with strong theoretical foundation now offer the possibility to integrate key ecological and evolutionary processes that shape species distribution and community structure. Although biodiversity is affected by multiple threats, most studies addressing the effects of future environmental changes on biodiversity focus on a single threat only. We examined the studies published during the last 25 years that developed scenarios to predict future biodiversity changes based on climate, land-use and landcover change projections. We found that biodiversity scenarios mostly focus on the future impacts of climate change and largely neglect changes in land use and land cover. The emphasis on climate change impacts has increased over time and has now reached a maximum. Yet, the direct destruction and degradation of habitats through land-use and land-cover changes are among the most significant and immediate threats to biodiversity. We argue that the current state of integration between ecological and land system sciences is leading to biased estimation of actual risks and therefore constrains the implementation of forward-looking policy responses to biodiversity decline. We suggest research directions at the crossroads between ecological and environmental sciences to face the challenge of developing interoperable and plausible projections of future environmental changes and to anticipate the full range of theirpotential impacts on biodiversity. An intergovernmental platform is needed to stimulate such collaborative research efforts and to emphasize the societal and political relevance of taking up this challenge.
 
Original Source: 
 
Titeux, N., Henle, K., Mihoub, J.-B., Regos, A., Geijzendorffer, I. R., Cramer, W., Verburg, P. H. and Brotons, L. (2016), Biodiversity scenarios neglect future land-use changes. Glob Change Biol, 22: 2505–2515. doi:10.1111/gcb.13272




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New Book: Aquatic Biodiversity Conservation and Ecosystem Services

The newly published by Springer "Aquatic Biodiversity Conservation and Ecosystem Services" volume examines the topic of local biodiversity conservation in the Asia-Pacific region, one of the most rapidly changing areas in the world. With a focus on aquatic systems, this book offers insight on the state of local biodiversity, challenges in management and conservation of biodiversity, and newly developed methods for monitoring biodiversity. In addition, because the service provided by an ecosystem for humans is interlinked with conservation, the final part is dedicated to evaluating the socioeconomic aspect of ecosystem services, with special reference to local biodiversity. In effect, all contributions provide information that is invaluable for effective conservation and sustainable use of biodiversity.

This work will interest all stakeholders in biodiversity conservation, including policy makers, NPOs, NGOs, environment-related industries, and biodiversity researchers, not only in the Asia-Pacific region, but also across the entire globe.

More information here.

 





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Article Alert: Linking Earth Observation and taxonomic, structural and functional biodiversity: Local to ecosystem perspectives

A new research paper Linking Earth Observation and taxonomic, structural and functional biodiversity: Local to ecosystem perspectives published in the journal Ecological Indicators looks at the ways in which earth observation (EO) techniques may provide a solution to overcome shortcomings in biodiversity monitoring by measuring entities of interest at different spatial and temporal scales. 

Abstract: 

Impacts of human civilization on ecosystems threaten global biodiversity. In a changing environment, traditional in situ approaches to biodiversity monitoring have made significant steps forward to quantify and evaluate BD at many scales but still, these methods are limited to comparatively small areas. Earth observation (EO) techniques may provide a solution to overcome this shortcoming by measuring entities of interest at different spatial and temporal scales.

This paper provides a comprehensive overview of the role of EO to detect, describe, explain, predict and assess biodiversity. Here, we focus on three main aspects related to biodiversity taxonomic diversity, functional diversity and structural diversity, which integrate different levels of organization molecular, genetic, individual, species, populations, communities, biomes, ecosystems and landscapes. In particular, we discuss the recording of taxonomic elements of biodiversity through the identification of animal and plant species. We highlight the importance of the spectral traits (ST) and spectral trait variations (STV) concept for EO-based biodiversity research.

Furthermore we provide examples of spectral traits/spectral trait variations used in EO applications for quantifying taxonomic diversity, functional diversity andstructural diversity. We discuss the use of EO to monitor biodiversity and habitat quality using differ-ent remote-sensing techniques. Finally, we suggest specifically important steps for a better integrationof EO in biodiversity research.EO methods represent an affordable, repeatable and comparable method for measuring, describing,explaining and modelling taxonomic, functional and structural diversity. Upcoming sensor developmentswill provide opportunities to quantify spectral traits, currently not detectable with EO, and will surelyhelp to describe biodiversity in more detail. Therefore, new concepts are needed to tightly integrate EOsensor networks with the identification of biodiversity. This will mean taking completely new directionsin the future to link complex, large data, different approaches and models.

Original reseach:

A. Lausch, L. Bannehr, M. Beckmann, C. Boehm, H. Feilhauer, J.M. Hacker, M. Heurich, A. Jung, R. Klenke, C. Neumann, M. Pause, D. Rocchini, M.E. Schaepman, S. Schmidtlein, K. Schulz, P. Selsam, J. Settele, A.K. Skidmore, A.F. Cord, Linking Earth Observation and taxonomic, structural and functional biodiversity: Local to ecosystem perspectives, Ecological Indicators, Volume 70, November 2016, Pages 317-339, ISSN 1470-160X, http://dx.doi.org/10.1016/j.ecolind.2016.06.022

 





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EU BON workshop "Biodiversity research for and by citizens in Eastern Europe: tools, information services and public engagement"

The EU BON workshop "Biodiversity research for and by citizens in Eastern Europe: tools, information services and public engagement" was organized to present the EU BON citizen science gateway, share accomplishments of the project, promote products, raise and discuss challenges of citizen science and facilitate networking between countries, especially eastern and central European countries.

There were 33 participants from Baltic countries and Finland and EU BON partners from Norway, Spain, Israel and Brussels. First day was showcasing the citizen science initiatives in Estonia, following best practice examples from EU BON consortium. During the second day the participants got a chance to learn the tools and methods for citizen science data management by ECSA and EU BON. This was followed by world cafe style discussion about the needs of citizen science initiatives and Pan-European citizen science gateway. One of the important conclusions for Baltic countries is that there is a need for stronger collaboration and supportive infrastructure to make citizen science more effective and also deliver accessible data to research community.

Some workshop participants also took part of Tartu Mini-BioBlitz on 29th June, first BioBlitz in Estonia. BioBlitz participants observed 239 species of animals, plants and fungi .

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Workshop agenda

Read a first hand report form the workshop in the two great blog posts by Egle Marija Ramanauskaite (a workshop participant from Lithuania):

http://seplute.tumblr.com/post/146841955105/citsci-overtakes-the-baltics-citizen-science

http://seplute.tumblr.com/post/146844410470/citizen-science-workshop-in-tartu-recap-of-day-2





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Joint forces to enhance access to biodiversity monitoring data

EU projects EuMon and EU BON call out to monitoring programs to share data and expertise for building the European Biodiversity Portal.

Combining forces, two large scale EU projects, EuMon and EU BON, are set to compile the largest data collection on biodiversity monitoring activities in Europe to date. Using existing biodiversity data and metadata collected by the two projects, the initiative is a stepping stone in completing a comprehensive European Biodiversity Portal. The projects now call out to monitoring programs across the Old Continent and beyond, to join in, provide information about their schemes and share their expertise for the cause.

For its life span between 2004 and 2008 the project EU-wide monitoring methods and systems of surveillance for species and habitats of Community interest (EuMon) created Europe's most comprehensive metadata catalogue of biodiversity monitoring activities.

Started in 2012, the five-year project Building the European Biodiversity Observation Network(EU BON) has been working towards building a new European Biodiversity Portal where this information is collected, highlighted and widely shared for future research and applied biodiversity conservation. The beta version is now all set up and available to test here.

   

To answer knowledge gaps since the project has ended in 2008, the original EuMon monitoring meta database is being further expanded with new information on data availability and access, as well as with new remote sensing data. Previously underrepresented, the marine realm is now also included in the EuMon collection.

"Monitoring data has received a central stage in recent years, a process largely facilitated by the instalment of the Intergovernmental Platform on Biodiversity and Ecosystem Services (IPBES). However, while knowledge about monitoring efforts is important, we still miss a large variety of available programs and biodiversity data", explains EuMon's Project Leader Prof. Dr. Klaus Henle, Helmholtz Centre for Environmental Research - UFZ.

"We, therefore, currently aim to increase and update the number of monitoring programs in the EuMon catalogue, as the catalogue still covers less than half of all existing programs in Europe", adds EuMon Project Coordinator, Dirk Schmeller, UFZ.

In a joint initiative EuMon and EU BON are now looking to create the opportunity for monitoring program coordinators to publish their data by using the data publishing service of the EU BON portal (data embargos also possible).

The service will provide all interested parties with a professional database platform with a large amount of implications. For example, coordinators can receive information about related monitoring programs in different countries. Initiatives could integrate their data and compare the trends and status across different countries and regions. Volunteers can find contacts about schemes in their regions they may consider to join.

Using the data publishing service of EU BON will also facilitate data sharing with the Global Biodiversity Information Facility.

"The ultimate goal of EU BON is to build a comprehensive European Biodiversity Portal that will then feed into a Global Portal currently developed by GEO BON. This initiative will provide a completely new holistic way for analyzing global trends and processes. We invite projects from across Europe to publish their datasets via the European Biodiversity Portal and become a part of this one-of-a-kind initiative", concludes Dr. Hannu Saarenmaa, University of Eastern Finland and Work Package leader in EU BON.

How to take part:

To access the EuMon database, please visit http://eumon.ckff.si/biomat. For sharing information about your monitoring program, please register here. You will then be able to provide metadata about your scheme via a simple online questionnaire. Answering the full set of questions is desirable, but not compulsory.





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Article Alert: Has land use pushed terrestrial biodiversity beyond the planetary boundary? A global assessment

The planetary boundaries framework attempts to set limits for biodiversity loss within which ecological function is relatively unaffected. In a recent article in Science Newbold et al. present a quantitative global analysis of the extent to which the proposed planetary boundary has been crossed. 

Abstract: 

Land use and related pressures have reduced local terrestrial biodiversity, but it is unclear how the magnitude of change relates to the recently proposed planetary boundary ("safe limit"). We estimate that land use and related pressures have already reduced local biodiversity intactness—the average proportion of natural biodiversity remaining in local ecosystems—beyond its recently proposed planetary boundary across 58.1% of the world’s land surface, where 71.4% of the human population live. Biodiversity intactness within most biomes (especially grassland biomes), most biodiversity hotspots, and even some wilderness areas is inferred to be beyond the boundary. Such widespread transgression of safe limits suggests that biodiversity loss, if unchecked, will undermine efforts toward long-term sustainable development.

The study is available at http://dx.doi/10.1126/science.aaf2201

 





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The latest ASEAN Biodiversity Updates

The ASEAN BIODIVERSITY UPDATES are published by the ASEAN Centre for Biodiversity (ACB) to keep stakeholders informed of news about biodiversity concerns and efforts that are relevant to the ASEAN region. In its latest issue the newsletter provides an overview of the 2016  World Environment Day, as well as gives information about  the new ACB headquarters at the University of the Philippines Los Baños and the organization's training programs.

A special feature gives insights on the Nusa Penida Marine Protected Area in Indonesia, followed by country-specific biodiversity news from accross Southeast Asia.

The full issue is available here.





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Article alert: Local biodiversity is higher inside than outside terrestrial protected areas worldwide

Are protected areas working when it comes to promoting biodivesity? A new study, published in Nature Communications, shows that local biodiversity is actually higher within, rather than outside protected areas.

Abstract: 

Protected areas are widely considered essential for biodiversity conservation. However, few global studies have demonstrated that protection benefits a broad range of species. Here, using a new global biodiversity database with unprecedented geographic and taxonomic coverage, we compare four biodiversity measures at sites sampled in multiple land uses inside and outside protected areas. Globally, species richness is 10.6% higher and abundance 14.5% higher in samples taken inside protected areas compared with samples taken outside, but neither rarefaction-based richness nor endemicity differ significantly. Importantly, we show that the positive effects of protection are mostly attributable to differences in land use between protected and unprotected sites. Nonetheless, even within some human-dominated land uses, species richness and abundance are higher in protected sites. Our results reinforce the global importance of protected areas but suggest that protection does not consistently benefit species with small ranges or increase the variety of ecological niches.

Original Source:

The original article is openly accessible at:

http://dx.doi.org/10.1038/ncomms12306





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Article Alert: Fostering integration between biodiversity monitoring and modelling

A new editorial, published in the Journal of Apllied Ecology looks at modelling and monitoring as methods for adaptive biodiversity management in the 21st century.

Abstract: 

With increasing threats on biodiversity, informed conservation decisions need to be based on currently observed and future predicted trends of biodiversity (Pereira, Navarro & Martins 2012; Guisan et al. 2013). In this regard, two essential components supporting informed biodiversity conservation decisions are good monitoring data to assess recent and ongoing trends (Collen et al. 2013; Pereira et al. 2013) and robust models to anticipate possible future trends (Pereira et al. 2010a; Akcakaya et al. 2016). Models benefit from robust monitoring data sets, that is repeated observations of biodiversity, as they need data to be fitted or validated, but models can also help assess data representativeness (e.g. by highlighting any bias), support proper data collection (e.g. covering the relevant gradients) or be used to make more effective use of biodiversity observations (Guisan et al. 2006, 2013; Ferrier 2011).

Read more in the open access paper.





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The GEO Handbook on Biodiversity Observation Networks

Recently published the GEO Handbook on Biodiversity Observation Networks presents a powerful resource that will provide valuable guidance to those committed to protecting, sustaining and preserving biodiversity across the planet. The practical experience which GEO BON has accumulated through its own actions, and through the efforts of its network partners, is a valuable resource to biodiversity information systems everywhere—from those just starting out in places where there has previously been little information, to large operations holding vii enormous amounts of data and wishing to know how better to use it. 

The Group on Earth Observations (GEO) is a voluntary international partnership of 102 governments and 92 participating organisations which share a vision of a future in which decisions and actions for the benefit of humankind are informed by coordinated, comprehensive and sustained Earth observations. GEO achieves its mission largely through self-organising communities focused on important Earth observation domains where decision-making will benefit from data that is shared broadly and openly. These communities form connected systems and networks, creating a Global Earth Observation System of Systems (GEOSS).

During its first ten-year implementation period, 2005–2015, GEO identified biodiversity as a key ‘Societal Benefit Area’, resulting in the formation of the GEO Biodiversity Observation Network, GEO BON. As GEO moves into its second, ten-year implementation period, GEO BON is recognised as one of its strongest communities. It has helped to mobilise and coordinate the data and information needed for an effective response to the global threats faced by organisms, species and ecosystems. In collaboration with international treaty bodies such as the Convention on Biological Diversity (CBD) and the Ramsar Convention on Wetlands of International Importance, GEO BON has worked with national conservation agencies and non-governmental organisations at scales from regional to global. These efforts have revealed both the benefits of working together and the challenges of such a complex, but urgent task, not least of which is filling the remaining large gaps in data and information. 





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The Future of the European Biodiversity Observation Network: 4th EU BON Roundtable

The 4th EU BON roundtable took place on 17 November 2016 in the Museum für Naturkunde in Berlin. Focused on the topic "Pathways to sustainability for EU BONs network of collaborators and technical infrastructure" the 35 participants discussed key questions with regards to the sustainability of the EU BON network and products, and shared their rich expertise, coming from different backgrounds ranging from science to policy.

The Roundtable brought together key European users and stakeholders, such as the European Environment Agency, UNEP GRID, and the GEO secretariat, including 27 different institutions and organisations, as well as European funded projects, infrastructures and networks that share the EU BON objectives of assembling biodiversity and ecosystem-related data and knowledge, such as Lifewatch, the European Citizen Science Association (ECSA), ECOPOTENTIAL, EKLIPSE and others.


Credit: Florian Wetzel

In her welcome address, Katrin Vohland, head of the Science Programme "Public Engagement with Science" and task lead for stakeholder engagement in EU BON explained that key lessons learnt are that:

  1. stakeholder identification may yield unexpected results as in the case of EU BON where next to scientifically based organisation less practitioners but more citizen scientists seem to become stakeholder;

  2. early and continuous connections are necessary, as for example to other EU initiatives and projects;

  3. target group specific communication avoiding acronyms helps; and

  4. the idea of teal organisations may support overcoming the limitations to  make networks economically sustainable - which are important but non-monetary assets.  

While former Roundtables addressed European policy, citizen science and the link to practitioners, this final EU BON Stakeholder event discussed the future and sustainability of the European biodiversity observation network and its products and tools.

Key questions for the participants were:

  • How can the many different EU BON products be sustained and further developed after the project ends in May 2017?

  • Which institutions will host the products in the future and what key products could be further developed by EU BON to meet European and global policy and research needs (e.g. for monitoring, reporting)?

  • How can a European Biodiversity Network as a whole be sustained in order to serve as a central infrastructure and pool of expertise for generating biodiversity data and information on a European scale?

Ideas and plans were developed to secure the sustainability and long term re-use of EU BON products. More information on the outcomes of the meeting can be found below in the minutes and the presentations given during the day.

The report form the meeting was officially published in RIO Journal as a part of the dedicated EU BON outputs collection:

Wetzel F, Despot Belmonte K, Bingham H, Underwood E, Hoffmann A, Häuser C, Mikolajczyk P, Vohland K (2017) 4th European Biodiversity Observation Network (EU BON) Stakeholder Roundtable: Pathways to sustainability for EU BONs network of collaborators and technical infrastructure. Research Ideas and Outcomes 3: e11875. https://doi.org/10.3897/rio.3.e11875

For further information please contact:

Dr. Katrin Vohland, Museum für Naturkunde Berlin,  Email: katrin.vohland@mfn-berlin.de

Dr. Florian Wetzel, Museum für Naturkunde Berlin,  Email: florian.wetzel@mfn-berlin.de

Presentations from the meeting: 

1. EU BON_RT_Katrin Vohland

2. Key achievements _ Christoph Häuser

3.1 EUBON Products_ Lauren Weatherdon

3.2 EU BON products and stakeholders_David Rose

4. EU BON and modelling tools_Bill Kunin

5. CS and EU BON tools_Bernat Claramunt

6. Businessplan_Sustainability_Dirk Schmeller

7 .EKLIPSE_EUBON_Carsten Nesshöfer-Dirk Schmeller

8. EEA - EEA_EU BON_Beate Werner

9. LifeWatch_Wouter Los_Christos Arvanitidis

10. Thoughts on Sustainability_Gary Geller

11. Biodiversity data, gaps and effors_Florian_Wetzel

12. EUBON-portal_Tim Robertson





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New RIO contribution: Summary report and strategy recommendations for EU citizen science gateway for biodiversity data

A new report has been added to the dedicated EU BON Outputs Collection in the innovative RIO journal. The paper reviews biodiversity related citizen science in Europe, specifically the data mobilization aspect and gives an overview of citizen science related activities in the project EU BON.

In addition, recommendations for a Pan-European citizen science gateway and data mobilization efforts will be given, with the aim of filling in existing biodiversity data gaps. Also the EU BON citizen science gateway is described, which is a part of the European Biodiversity Portal (http://biodiversity.eubon.eu) with citizen science related products. 

Citizen science is a vital element for EU BON with regards to biodiversity information sources that provide data for research and policy-making. CS data are used by many research institutes, public organisations and local data portals. CS data offer volumes of field data, which would otherwise not be possible to collect with the limited resources of research institutes and agencies. Thus one of the main targets for EU BON is to make CS data available through various efforts, for example through networking and by using new technologies for data mobilisation. Overall, one of the main goals of a common EU citizen science Gateway is to integrate CS data for European biodiversity research. EU BON also seeks to develop a strategy for achieving this goal and encourages educational aspects of citizen science through networking and the development of tools.

Original Source:

Runnel V, Wetzel F, Groom Q, Koch W, Pe’er I, Valland N, Panteri E, Kõljalg U (2016) Summary report and strategy recommendations for EU citizen science gateway for biodiversity data. Research Ideas and Outcomes 2: e11563. https://doi.org/10.3897/rio.2.e11563





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Setting temporal baselines for biodiversity could be an impediment for capturing the full impact of anthropogenic pressures

Published just recently, a new open access EU BON article discusses the need for additional research efforts beyond standard biodiversity monitoring to reconstruct the impacts of major anthropogenic pressures and to identify meaningful temporal baselines for biodiversity.

The article, published in Scientific Reports, reports on the temporal baselines that could be drawn from biodiversity monitoring schemes in Europe and compares those with the rise of important anthropogenic pressures.

 

With most biodiversity monitoring schemes initiated late in the 20th century, well after anthropogenic pressures had already reached half of their current magnitude, the team of scientists found that setting temporal baselines from biodiversity monitoring data would underestimate the full range of impacts of major anthropogenic pressures.

The authors stress that these limitations need to be explicitly acknowledged when designing management strategies and policies as they seriously constrain our ability to identify relevant conservation targets aimed at restoring or reversing biodiversity losses.

 

Find out more in the original research paper:

Mihoub J B, Henle K, Titeux N, Brotons L, Brummitt N A, Schmeller D S (2017) Setting temporal baselines for biodiversity: the limits of available monitoring data for capturing the full impact of anthropogenic pressures. Scientific Reports. http://dx.doi.org/10.1038/srep41591





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Latest in our RIO Collection: Guidelines for scholarly publishing of biodiversity data from Pensoft and EU BON

While development and implementation of data publishing and sharing practices and tools have long been among the core activities of the academic publisher Pensoft, it is well-understood that as part of scholarly publishing, open data practices are also currently in transition, and hence, require a lot of collaborative and consistent efforts to establish.

Based on Pensoft's experience, and elaborated and updated during the Framework Program 7 EU BON project, a new paper published in the EU BON dedicated collection in the open science journal Research Ideas and Outcomes (RIO), outlines policies and guidelines for scholarly publishing of biodiversity and biodiversity-related data. Newly accumulated knowledge from large-scale international efforts, such as FORCE11 (Future of Research Communication and e-Scholarship), CODATA (The Committee on Data for Science and Technology), RDA (Research Data Alliance) and others, is also included in the Guidelines.

The present paper discusses some general concepts, including a definition of datasets, incentives to publish data and licences for data publishing. Furthermore, it defines and compares several routes for data publishing, namely: providing supplementary files to research articles; uploading them on specialised open data repositories, where they are linked to the research article; publishing standalone data papers; or making use of integrated narrative and data publishing through online import/download of data into/from manuscripts, such as the workflow provided by the Biodiversity Data Journal. Among the guidelines, there are also comprehensive instructions on preparation and peer review of data intended for publication.

Although currently available for journals using the developed by Pensoft journal publishing platform ARPHA, these strategies and guidelines could be of use for anyone interested in biodiversity data publishing.

Apart from paving the way for a whole new approach in data publishing, the present paper is also a fine example of science done in the open, having been published along with its two pre-submission public peer reviews. The reviews by Drs. Robert Mesibov and Florian Wetzel are both citable via their own Digital Object Identifiers (DOIs).

###

Original source:

Penev L, Mietchen D, Chavan V, Hagedorn G, Smith V, Shotton D, Ó Tuama É, Senderov V, Georgiev T, Stoev P, Groom Q, Remsen D, Edmunds S (2017) Strategies and guidelines for scholarly publishing of biodiversity data. Research Ideas and Outcomes 3: e12431. https://doi.org/10.3897/rio.3.e12431





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Biodiversity data, novel tools and services: EU BON presents key results at its Final Meeting

Taking place from 14 to 16 March 2017, the Final EU BON Meeting served as a platform to present key outputs from the FP7 EU-funded project EU BON " Building the European Biodiversity Observation Network" which aims to advance biodiversity knowledge by building a European gateway for biodiversity information and by integrating and harmonising a wide range of biodiversity data.

Hosted by the Royal Belgian Institute of Natural Sciences in Brussels and at the stunning backdrop of Botanic Garden in Meise, EU BON partners met with stakeholders from research, European policy and citizen science to learn about the project's results and outputs and to discuss the future of a European Biodiversity Observation Network.


Credit: Donat Agosti

EU BON represents a joint effort of 31 partners from 15 European countries, Israel, the Philippines, Brazil and more than 30 associated partners. The project worked on the establishment and adoption of new data standards, the development of tools, the integration of advanced techniques for data analysis and the development of new approaches and strategies for future biodiversity monitoring and assessment.


Group Photo; Credit: D. Schmeller

At the Final Meeting participants had the opportunity to learn about and test products and services developed by project members during the period 2012-2017. These include a range of tools for data analysis, such as GeoCAT -- a tool that performs rapid geospatial analysis to ease the process of Red Listing taxa and AquaMaps -- a toolkit that models the distribution and makes predictions of where aquatic species occur naturally. Another group of tools -- the GBIF Integrated Toolkit and ARPHA-BioDiv facilitates the process of data sharing, integration and publishing.

Among the services presented, worthy of special mention is the EU BON Unified Taxonomic Information Service (UTIS) that allows the running of a federated search on multiple European taxonomic checklists by scientific name or vernacular name strings. These include the Pan-European Species directories Infrastructure (EU-Nomen), the European Nature Information System (EUNIS), the Catalogue of Life, the World Register of Marine Species (WoRMS), the GBIF Checklist Bank and the Plazi Treatment Bank.

All these web applications are bound together under the umbrella of the EU BON European Biodiversity Portal, with highly relevant contributions to the aims of the Group on Earth Observation's Biodiversity Observation Network (GEO BON). Besides applied tools and software, the portal also serves as an online library for manuals, guidelines, factsheets, case studies, policy recommendations and other documents.

Learn more about these tools in our Final Brochure.

For live updates, follow EU BON on Twitter, or like us on Facebook. See the live Tweet feed from the meeting at #eubongm.

 

 





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EU BON featured in CORDIS News: New tools to increase the accuracy of biodiversity monitoring

A recent story, featured on CORDIS News, focuses on EU BON and its achievements. Based on a recent project's publication in ‘Nature – Scientific Reports’ and information from the project, the new item discusses important project outcomes, including the European Biodiversity Portal, and their contribution to drawing a more accurate picture of current biodiversity to aid efforts for sustainable governance of natural resources.

Here is a snippet from the news feature on CORDIS: 

A recent article published in the journal ‘Scientific Reports’ states, ‘Monitoring schemes provide an important source of information on biodiversity change, guiding further research, conservation assessment and planning.’ The article cites The European Biodiversity Portal, designed and implemented by the EU-funded EU BON project that offers researchers, policy-makers, and others interested in biodiversity, easy access to insights on trends and modelling techniques.

The project worked on the establishment and adoption of new data standards, the development of tools to enable collaborative research and the encouragement of citizen-scientists. As a result, EU BON, by building the European Biodiversity Observation Network, has created advanced techniques for data analysis along with new approaches for modelling and strategies for future biodiversity monitoring.

Read the full publication here.





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How Ecosystem and Biodiversity data and knowledge can support the GEO objectives: EU BON’s session at the European GEO Workshop

The 11th European Projects GEO Workshop took place between 19-21 June 2017, in Helsinki, Finland, bringing together European stakeholders interested in and actively contributing to the Global Earth Observations System of Systems (GEOSS).

Alongside the plenary (see presentations here), the conference featured 20 sessions looking at various aspects GEOSS, its objectives and their implementation.

Among those EU BON took part in a dedicated session titled ‘How Ecosystem and Biodiversity data and knowledge can support the GEO objectives’, alongside fellow projects and initiatives, and associated partners ECOPOTENTIAL, LTER-Europe, GLOBIS-B, EKLIPSE and ENEON.


Credit: F. Wetzel

The session aimed to inform about recent developments of relevant projects that focus on Ecosystems and Biodiversity and also outline how the generated data and knowledge can support the GEO objectives and inform relevant policies on a European and global scale.  

EU BON, as a now completed project, opened the session by presenting its major products in particular the European Biodiversity Portal and how current and future projects can build on the outcomes achieved.

Overall, the session gave the opportunity to learn about the different approaches of selected EU-projects that address the mobilization, integration and analysis of biodiversity and ecosystem data, their current achievements and existing barriers. Here are some of the Key Messages that emerged from the session: 

  • For biodiversity and ecosystem approaches, European level efforts are needed to achieve comprehensive data coverage and full open access, especially for in situ data integration.
  • Existing European-level data portals and information platforms need to be sustained and considered as integration points for national and local data hubs. 
  • Systematic approaches for biodiversity are needed, which means linking biotic and abiotic data and improving harmonization efforts for the whole data cycle/ workflows from data collection, analysis and dissemination for different disciplines (SBAs). 
  • Essential (Biodiversity) Variables (EBVs) are a key concept / framework especially for monitoring / long-term observations that should be applied for all available biodiversity/ecosystem data fields.
  • Use examples from existing projects and networks as successful blueprints for bottom-up/user-driven approaches in GEOSS that relate to knowledge and user needs at the local scale. 




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New EU BON research reviews the most relevant sources for European biodiversity observation data to identifying important barriers and fill gaps

Recently published in Biological Conservation, the new EU BON supported paper is titled "Unlocking biodiversity data: Prioritization and filling the gaps in biodiversity observation data in Europe".
 
Abstract:
 
Large quantities of biodiversity data are required to assess the current status of species, to identify drivers of population and distributional change, and to predict changes to biodiversity under future scenarios. Nevertheless, currently-available data are often not well-suited to these purposes. To highlight existing gaps, we assess the availability of species observation data in Europe, their geographic and temporal range, and their quality. We do so by reviewing the most relevant sources for European biodiversity observation data, and identifying important barriers to filling gaps. We suggest strategies, tools and frameworks to continue to fill these gaps, in addition to producing data suitable for generating Essential Biodiversity Variables (EBVs). Our review of data sources shows that only around a third of data-providers provide unrestricted data access. Particularly large geographic gaps exist in Eastern European countries and many datasets are not suitable for generating EBVs due to the absence of long-term data. We highlight examples built on recent experiences from large data integrators, publishers and networks that help to efficiently improve data availability, adopt open science principles and close existing data gaps. Future strategies must urgently consider the needs of relevant data stakeholders, particularly science- and policy-related needs, and provide incentives for data-providers. Hence, sustainable, longterm infrastructures and a European biodiversity network are needed to provide such efficient workflows, incentives for data-provision and tools.
 
 

 





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Symposium: Nature and Governance – Biodiversity Data, Science, and the Policy Interface

The EU BON project which is coordinated by the Museum für Naturkunde in Berlin/Germany has started on 1 December and will continue for 4.5 years. The EU BON Kickoff Meeting will be held in Berlin from 13 to 15 February 2013.
With respect to EU BON’s objectives the International Symposium "Nature and Governance – Biodiversity Data, Science, and the Policy Interface" will be held prior to the EU BON Kickoff Meeting from 11 to 12 February in Berlin with high-ranking speakers. You are most welcome to attend the Symposium.
The Museum für Naturkunde Berlin is pleased to host this international symposium and will bring together high-ranking speakers and guests from worldwide to talk and discuss about these
Major Topics:
- What (data) policy needs
- The future of biodiversity information: new ways for generating, managing, and integrating biodiversity data
- How new approaches / models can link scales and disciplines
- Broadening the base and opening up: new ways to engage the public and stakeholders in biodiversity monitoring and assessments
- Résumé / conclusions
For more details, please have a look at the programme page.
The 1st day of the Symposium and the reception will be held "under the dinosaurs" in the central exhibition hall of the Museum für Naturkunde in Berlin.
The 2nd day will be held in the Seminaris Conference Center in the quiet south-west of Berlin. The closing of the Symposium will be celebrated as "Come together & Ice-Breaker for EU BON Kickoff Meeting" in the nearby beautiful Large Green House of the Botanic Garden Berlin.
If you want to take part, please register at the registration page.

 





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Workshop: Towards a Roadmap for Research Infrastructures on Biodiversity and Ecosystem research in Europe

The Research Infrastructures Unit of DG RTD and the infrastructure project LifeWatch invites you to a 1 and ½ day workshop : "Towards a Roadmap for Research Infrastructures on Biodiversity and Ecosystem research in Europe". The workshop will take place Brussels on 19 and 20 March 2013.
The overall objective of this workshop is to develop synergies between ESFRI research infrastructures (RI), existing research infrastructures implemented as Integrating Activities (IA), Integrated Projects (IP) and Joint Programming Initiatives (JPI) which are relevant to Biodiversity and Ecosystem research.
The following topics will be discussed:
1. Synergy between the biodiversity components of different initiatives, also in view of the supporting role of the European research infrastructures in this area.
2. A strategy for the development of biodiversity research infrastructures in the next ten years in view of emerging scientific and technical challenges.

Further information: EuroMarine





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ALTER-Net Conference 2013: Science underpinning the EU 2020 Biodiversity Strategy

The primary focus of the conference will be the objectives and targets of the EU's 2020 Biodiversity Strategy, which should be realized by the end of this decade. Being a science-policy interface network, ALTER-Net wants to help the EU in realizing these targets by providing scientific knowledge, e.g. by pointing out possible weaknesses, opportunities and necessities, and by helping to find solutions and evidence-based actions.
Event web page: ALTER-Net Conference 2013.




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Natural History Museum Symposium, London, 3-4 June, 2013: Tropical biodiversity in the 21st century

 

A conference marking the start of the Natural History Museum’s Biodiversity Initiative has been announced to take place on 3-4 June, 2013 in the NHM, London.  A workshop of the Genomic Observatories Network will be also hosted during the conference

The conference will focus on how inter-disciplinary, genomic approaches can be developed to accelerate the study of biodiversity and function of tropical ecosystems.

More information on the conference can be found here.





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Biodiversity Informatics Horizons 2013

 

Biodiversity Informatics Horizons 2013 (BIH2013) is part of a continuing process that helps to structure and organise the biodiversity informatics community at the European level and beyond. BIH2013 will take place over 3 full days, from lunchtime on Tuesday 3rd September to lunchtime Friday 6th. The venue will be in Rome but is still awaiting final confirmation.

To respond to the challenges and priorities of the next decade in biodiversity and ecosystems research, structuring bottom-up and top-down interactions on informatics and cooperating across the community is now an essential activity. Cooperation avoids unnecessary duplication of activity. It helps to maximise and focus effort on building the information resources, tools and infrastructure the scientists and policymakers need. We all know the importance of this as we face environmental, societal and human health challenges on global scale. Science in support of policy to mitigate biodiversity loss due to climate and other man-made changes, to assure food security, and to combat invasive species (to give just a few examples) can only be achieved by full integration of the biodiversity research community through a commonly-shared, sustainable e-infrastructure across all sub-disciplines that reliably serves science and society alike. Hence, the need to coordinate.

Invited speakers will review challenging areas and promising technologies in biodiversity informatics, pathways to sustainable implementation and changing the community culture. A panel discussion with experts from regions of the world beyond Europe will explore opportunities for international cooperation that lead towards a sustainable global infrastructure. Demonstration and training activities, provided by some of the FP7 projects associated with the conference will allow delegates to see first-hand some of the new and exciting infrastructure building blocks that will come together to deliver the LifeWatch vision.

To read more and register for the conference, please click here.

For early registration conference fee, please register before 31 July.





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Biodiversity Knowledge 2nd Conference

The FP7 Coordination action BiodiversityKnowledge on "designing a network of knowledge on biodiversity and ecosystem services to inform decision-making in Europe" is organizing its second international conference on September 24th to 26th in Berlin.
The objective of this second conference is to discuss and finalize the recommended design of a future Network of Knowledge (NoK) on biodiversity and ecosystem services in Europe.
Considering the importance of this future Network of Knowledge, representatives of the biodiversity and ecosystem service knowledge community - from practitioners, researchers to policy makers - are warmly invited to actively participate in this conference and to contribute to the design process of a European Network of Knowledge during 2013.
Event web page: Biodiversity Knowledge 2nd Conference





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E-seminar: Data Exchange for Biodiversity Conservation in Freshwater Ecosystems: Introducing the BioFresh Platform and Data Portal

The FP7 projects BioFresh and WaterDiss2.0 are pleased to announce the E-seminar "Data Exchange for Biodiversity Conservation in Freshwater Ecosystems: Introducing the BioFresh Platform and Data Portal". The E-seminar will take place on Thursday, November 28 from 14:00 to 15:00 CET.

It will be hosted on the seminar website (http://waterdiss.eu/eseminar-biofresh) where a link will be available for it.

The E-seminar will introduce the audience to the usage of the BioFresh Platform and Data Portal, in order to ensure a better understanding of the different components. Aaike De Wever, Science Officer of BioFresh, will explain which data and information are integrated and for which contributions BioFresh is looking. Participants are encouraged to join in for a live discussion via "Citrix go to Webinar".

If you want to participate in the e-seminar, you only need to send an email to evelyn.lukat@ecologic.eu. You will receive further information via mail. If you decide on participating later, you can also simply join the seminar by following the link provided on November 28th on this website.

A few important notes:

  • The e-seminar will be conducted in English
  • The video and the questions asked during the session will be available on the websites of the BioFresh data portal and this website.

Technical details on the E-seminar:

  • When clicking on the link, the application Citrix Go To Webinar will be downloaded. Nothing will be installed on your computer. However, please make sure that your computer is able to run java applications.
  • Please make sure that the sound system on your computer works. If your sound system does not work properly, you can also dial in via phone. Please check the dial-in number for your country on this website by November 28th.

 

 

 





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Building Biodiversity Workflows with Taverna (Manchester, UK)

The course is a two-day hands-on training event. The course will accommodate 10-15 researchers. The program consists of introductory lectures, practical computer work, and discussions. Researchers will be contacted upon admission in order to consider their own research objectives for the course. more ...





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Biodiversity Day at GEO-X "From observation to decision"

Tue, 14th Jan 2014, 9:00-16:45, GEO-X Plenary, CICG Room 2 (entrance floor), Geneva
 
The Swiss Government, with the help of the Swiss Biodiversity Forum, is organizing this Biodiversity Special Event in the frame of the 10th GEO Plenary meeting and Ministerial Summit in Geneva, to raise awareness of the importance of the biodiversity and ecosystem services activities in GEO (Global Earth Observation).
 
The programme offers talks on Biodiversity Observation Networks at all scales, on how to use spatial data for ecosystem assessments, and provides case studies on how to connect different user needs with biodiversity and ecosystem observations. Moreover, there will be a poster presentation of different biodiversity observation projects in Switzerland in the Swiss Pavillon, and a panel discussion on "How to improve biodiversity information and use it for decision making". (see the attached programme). 
 
The event is open to the public. Registration is free of charge. Lunch is only provided to registered participants. 
 
Please register until the 10th of January 2014 at:  http://www.biodiversity.ch/e/events/geo-x/

 





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2014 SCIENCE POLICY SYMPOSIUM to support the implementation of the 2020 Biodiversity strategy and the EU Water Framework Directive

The 2014 SCIENCE POLICY SYMPOSIUM to support the implementation of the 2020 Biodiversity strategy and the EU Water Framework Directive will be held between 29-30 Jan 2014 in the Museum of Natural Sciences (RBINS), Brussels. The symposium is jointly organised by the EU FP7 funded projects BioFresh and REFRESH.

Numerous EU biodiversity and water related policies have been designed to protect freshwater ecosystems and ensure their sustainable use. However, major challenges still persist in the implementation of these policies. Freshwater ecosystems support 10% of all animal species on Earth and provide a diverse array of functions and services that contribute to human well-being. In recent decades global freshwater biodiversity has declined at a greater rate compared to terrestrial and marine ecosystems.

The Science Policy Symposium for Freshwater Life is organised with the aim of bringing together policy makers and stakeholders from the water, energy and conservation sector, NGOs, the scientific community and selected experts to discuss challenges to implementing the 2020 Biodiversity strategy and the EU Water Framework Directive.

 

 





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Seminar ‘Use of biodiversity in research according to the upcoming EU regulation’

On Tuesday March 4, 2014 at the Science Park De Uithof in Utrecht a seminar will address the changing legal situation in the use of living material (genetic resources) for scientific research. This change may affect ongoing and new research carried out in universities and related research institutes.
In many universities research is carried out using plants or animals, or derivatives thereof. Now, context is changing after the Nagoya Protocol was agreed upon in 2010, and the EU has worked towards regulation of the new requirements. These are to become effective when the Nagoya Protocol comes into force, which is expected to happen after mid-2014. Shortly afterwards, the EU regulation will also become effective. The Council, European Parliament and the European Commission have come to an informal agreement that will shortly be finalised.
The seminar Use of biodiversity in research according to the upcoming EU regulation aims to introduce the new legislation to the scientific community. The seminar is of relevance to University boards and their legal departments, as well as scientists and managers of collections.
 
For more details and to apply please see here





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BiodiversityKnowledge at the EU parliament "Towards a consolidated Network of Knowledge on biodiversity and ecosystem services in Europe"

On the 1st of April, between 9:30 and 16:30, the BiodiversityKnowledge project organises a conference where outcomes will be presented and widely discussed with policy makers, science and other stakeholders at the European parliament in Brussels. As final result, BiodiversityKnowledge will present a stakeholder’s document outlining a recommended design on how such a Network of Knowledge could operate and produce added value.

EU BON will be also presented at the confernce as one of the knowledge providers of the Network of Knowledge.

To counteract biodiversity loss, efforts have considerably increased over the past years to strengthen the science-policy-society interface on biodiversity and ecosystem services. There is indeed an active landscape of projects, institutions, organisations and individuals in Europe involved in this interface, all aiming to improve the knowledge flow so that decisions at different policy levels (from European, to national and local levels) are based on the best available knowledge.

With the 7th Environmental Action Programme and the start of Horizon2020 and its focus on innovative solutions for society, the need for more concerted activities in this context become even more important.

In this context, BiodiversityKnowledge (FP7 KNEU), an EU-funded coordination action has been set up to help to map, mobilise and organise this landscape focusing on the knowledge holders’ community. For this the project has been developing and testing a prototype Network of Knowledge since 2011 with more than 300 active participations of representatives of the biodiversity and ecosystems services knowledge community. Stakeholders involved ranged from practitioners and researchers to policy-makers.

Please find the conference agenda attached below.

 





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Biodiversity today for tomorrow

The International BION conference 2014 "Biodiversity today for tomorrow" will take placefrom September 17th to 19th in Bonn, Germany.

It will be organized by the BION office and its network partners and the following subthemes have already been proposed:

1: Basic research in biodiversity
2: Monitoring, assessment, prediction – biodiversity in space and time
3: Biodiversity and Human Development
4: Biodiversity for Food and Agriculture / Bioeconomy
5: Ethical aspects of biodiversity
6: Societal (social, cultural, political) impact
7: Capacity Building
8: Interdisciplinary approaches

More information is available on the BION website: http://www.bion-bonn.org/de/de/bion-kongress-2014

Please, see conference programme for details and use the possibility for online registration.

 





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International Seminar on Participatory Monitoring for the Management of Biodiversity and Natural Resources

 Recognizing the important role of innovation and benchmark the various initiatives of participatory monitoring in the world, the Ministry of Environment of Brazil, ARPA, the Chico Mendes Institute for Biodiversity Conservation, Mangrove Project in Brazil, Deutsche Gesellschaft für Internationale Zusammenarbeit (GIZ), Gordon and Betty Moore Foundation, Wildlife Conservation Society, Ecological Research Institute and Nordisk Fond og Miljø is Udvikling, with the support of the Convention on Biological Diversity are organizing the International Seminar on Participatory Monitoring for the Management of Biodiversity and Natural Resources to take place in Manaus, Brazil between 22 and 26 September 2014.
 
Worldwide there is a growing demand for information on the state of conservation of biodiversity as a key tool to support the management of natural resources and depending on the investment strategies of many countries in the protection of nature and sustainable resource use tool. Several initiatives for monitoring biodiversity and natural resources have emerged around the world in an attempt to meet this need. Many of these initiatives rely on the involvement of persons residing, use natural resources or participate in the management of the areas where they develop the monitoring, often from traditional populations.

The community involvement of these populations may happen for several reasons and through different mechanisms, increasing both related to biodiversity conservation as the empowerment of local communities results. Although varied, the role of populations has intensified and generating a wide range of initiatives generically called participatory monitoring. By understanding the enormous potential contribution to biodiversity conservation and local development, research organizations, non-governmental conservation organizations and governments huddled and development to enhance and disseminate participatory monitoring initiatives worldwide.
 
Find out more about participation and the agenda of the seminar in the attached document.




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Biodiversity and Food Security – From Trade-offs to Synergies

3rd International Conference on Biodiversity and the UN Millennium Development Goals - October 29-31, 2014, Aix-en-Provence, France
 
This international conference is the third in a series, organized by the French CNRSInstitut Ecologie et Environnement (InEE) and the German Leibniz Association (WGL).

The goal is to identify science-based solutions for global sustainability focusing on the issues of biodiversity and food security. Current ecological, economic and societal challenges for development require a holistic understanding of food security and environmental management: from this perspective, biodiversity can be seen as key to overcome trade-offs and to develop synergies between the food system and the conservation of landscapes, ecosystems, and species. The conference seeks to attract scientists from basic and applied research. It involves policy makers and other stakeholders concerned with biodiversity and food security themes who are interested in developing new solutions and strategies. It will connect researchers and stakeholders from natural sciences, social sciences, economics, humanities, technology and related fields.

http://biodiv2014.sciencesconf.org/

 





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Africa Rising: Mobilising Biodiversity Data for Sustainable Development conference

From 22 to 24 March 2015, the South African National Biodiversity Institute (SANBI) will host an international conference at Kirstenbosch National Botanical Garden, entitled, Africa Rising: Mobilising Biodiversity Data for Sustainable Development. The event is being organised in partnership with the Global Biodiversity Information Facility (GBIF) and the United Nations Environment Programme – World Conservation Monitoring Centre (UNEP-WCMC). It aims to:

  1. Accelerate regional understanding of the biodiversity data-science-policy value chain and draw attention to the opportunities and solutions that biodiversity data presents for sustainable development in Africa;
  2. Strengthen regional engagement, learning networks, and collaborative synergies with a view to streamlining the data-science-policy value chain; and
  3. Galvanise political commitment to mobilising Africa’s biodiversity data.

The event emanates from the project, Mobilising Africa’s Biodiversity Data, which is generously supported by the JRS Biodiversity Foundation and entails developing a strategy for capturing, digitising and publishing Africa’s policy-relevant biodiversity data whilst strengthening regional capacity and collaboration in biodiversity information management.

More information is available at: http://www.sanbi.org/news/sanbi-host-africa-rising-mobilising-biodiversity-data-sustainable-development-conference

 





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Empowering Biodiversity Research conference

There is a world of tools, standards and data out there, ready for you to use. Biodiversity Informatics deals with the application of informatics techniques to biodiversity information for improved management, presentation, discovery, exploration and analysis of scientific data. Combined with open data sources on the Internet, this is a powerful new approach in doing research. During this conference, organised by the Belgian Biodiversity Platform and several key institutes, we would like to take you on a trip to the world of biodiversity informatics & open data. After this conference a series of related workshops will be organized.





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3rd EU BON Stakeholder Round Table "Biodiversity data workflow - from data mobilisation to practice"

The 3rd EU BON Stakeholder Round Table "Biodiversity data workflow - from data mobilisation to practice" will take place on 10&11 December 2015 Granada, Spain.

One main objective of the round table is to understand how the workflow from data mobilisation to decision making functions in practice, including within the context of EU BON.

Firstly, we want to evaluate what kind of (biodiversity) data are available and what workflows and best practices already exist. Secondly, we want to assess which gaps still exist and what will be needed to improve the current situation to overcome existing barriers.

Please register here: http://societas.biodiv.naturkundemuseum-berlin.de/?q=node/64

 





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Global Biodiversity Assessment and Monitoring: Science, Data and Infrastructure Needs for IPBES and Beyond

 

"Global Biodiversity Assessment and Monitoring: Science, Data and Infrastructure Needs for IPBES and Beyond" is a joint symposium of the Future Earth Clusters ‘Global Biodiversity Assessment and Monitoring, Prediction and Reporting’ and "Support for IPBES", which will take place from 6 to 10 March 2016 in Monte Verita, Ascona, Switzerland. 

The symposium follows up on the initial meeting on "Global Biodiversity Monitoring" at Yale University in May 2015. The 2016 event will in particular bring biodiversity and global change scientists from Europe, Africa, and Asia to this discussion and add as additional focus the scientific needs for IPBES, in particular on indicators and scenarios. Key goals of the conference are to link the main research groups active in this area, improve data sharing, develop collaborative analyses, realize potential synergies and advance international cooperation. Work efforts to date have been organized into several working groups and the meeting will provide opportunity for these groups to advance or complete their work and for new initiatives to form. Future Earth is entering the next formative stage and the symposium is a forum to advance the role of biodiversity within Future Earth as well as develop or engage in new research and funding opportunities under its umbrella.

Please see here for the draft program and logistical information, and http://biodiversitymonitoring.org for more background about the Future Earth Biodiversity Monitoring cluster.

Further information on the event is available in the official announcement here.

 





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EU BON biodiversity data sharing and data publishing workshop

EU BON is organising a "Biodiversity data sharing and data publishing workshop" to take place in Sofia, Bulgaria on 22-23 March 2016. The event is directed to biologists and other life scientists from Eastern Europe who are actively involved in monitoring  and managing biodiversity data. A core topic of this training will be the  publishing of biodiversity data, in particular species occurrences, sample-based and citizen science data. The training will include a practical session during which participants will be assisted by experienced trainers from the EU BON project.

Addressing global problems, such as biodiversity loss and impacts of climate change requires open access to data. This was concluded by world leaders at Johannesburg Summit in 2002 when they established the Group for Earth Observations (GEO).  EU BON (Building the European Biodiversity Observation Network) seeks to enhance biodiversity data availability and integration, and is the European contribution to the GEO Biodiversity Observation Network.

All biodiversity databases need to be integrated in GEO. Therefore, EU BON undertakes capacity building of biodiversity communities (e.g. researchers, citizen scientists, non-governmental organisations) that are involved in collecting and disseminating biodiversity information, including monitoring initiatives.

The sessions on data sharing will cover introductory overview of key concepts,  demonstration and  practical  exercise using the GBIF Integrated Publishing Toolkit  (IPT). The Global Biodiversity Information Facility (GBIF) is the world's largest initiative for enabling free access to biodiversity data via internet.

Special attention will be paid to data paper publishing led by specialists from Pensoft Publishers - a company well known among biodiversity scientists worldwide for technologically cutting-edge open access journals, such as: Research Ideas and Outcomes, ZooKeys, Biodiversity Data Journal, Nature Conservation, and a strong advocate of data publishing. Registration of data in GEO registry system will be also addressed during the workshop.

The following topics will be covered (detailed program will follow):

  • The data publishing landscape, gaps and mobilization efforts
  • Demonstration and practical session on data publishing using the GBIF IPT: step-by-step demo will show in detail (and in practice) how to publish a dataset using IPT.
  • Data papers: types, structure, opportunities
  • Citizen Science gateway and demo of PlutoF Citizen Science module
  • GoldenGate Imagine tool and copyright issues
  • Registration of data in the GEO Registry System

To register and for more information, click here.





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Biodiversity Without Boundaries 2016

Biodiversity without Boundaries (BWB) 2016 takes place on 18-22 April in the biodiversity-rich, abundant, and beautiful Puerto Rico.

In collaboration with our Puerto Rico Network Partners - the Puerto Rico Department of Environmental and Natural Resources (DRNA) and the leading environmental and educational nonprofit Para la Naturaleza - the NatureServe Network’s annual conference will convene hundreds of the world’s leading conservationists for a week of plenaries, symposiums, workshops, panels, presentations, and field sessions.

To register and for more information, please visit the official event's page.





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Space - the final frontier for biodiversity monitoring

The ZSL Institute of Zoology is organizing a one day symposim "Space - the final frontier for biodiversity monitoring?" to take place on 29 April 2016. The event will bring together leading experts in biodiversity monitoring and satellite remote sensing to discuss ways to better capitalise on this technology to monitor biological diversity globally.

For more information on participation and logistics, please visit the official event 's page.





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2nd International GGBN Conference on Biodiversity Biobanking

The Botanic Garden and Botanical Museum Berlin and the Museum für Naturkunde Berlin are glad to welcome you to the 2016 GGBN conference, held from June 21 through June 24, 2016, in Berlin, Germany.

The Global Genome Biodiversity Network is a collaborative effort to cryo-preserve and provide access to genomic samples from across the Tree of Life.
Sessions and Workshops are planned on

  • Concerted collecting and sampling strategies to preserve the Tree of Life
  • Sampling the lost world in Natural History collections
  • Nagoya Protocol: consequences and solutions
  • Knowledge exchange: natural history meets applied biobanking
  • Implementing GGBN standards and best practice

More information here.