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Comparative Proteomic Analysis of Eleven Common Cell Lines Reveals Ubiquitous but Varying Expression of Most Proteins

Tamar Geiger
Mar 1, 2012; 11:M111.014050-M111.014050
Special Issue: Prospects in Space and Time




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Complementary Profiling of Gene Expression at the Transcriptome and Proteome Levels in Saccharomyces cerevisiae

Timothy J. Griffin
Apr 1, 2002; 1:323-333
Research




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Discordant Protein and mRNA Expression in Lung Adenocarcinomas

Guoan Chen
Apr 1, 2002; 1:304-313
Research




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Integrated Genomic and Proteomic Analyses of Gene Expression in Mammalian Cells

Qiang Tian
Oct 1, 2004; 3:960-969
Research




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Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics

Linn Fagerberg
Feb 1, 2014; 13:397-406
Research




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Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics

Shao-En Ong
May 1, 2002; 1:376-386
Research




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Evolution, expression, and substrate specificities of aldehyde oxidase enzymes in eukaryotes [Enzymology]

Aldehyde oxidases (AOXs) are a small group of enzymes belonging to the larger family of molybdo-flavoenzymes, along with the well-characterized xanthine oxidoreductase. The two major types of reactions that are catalyzed by AOXs are the hydroxylation of heterocycles and the oxidation of aldehydes to their corresponding carboxylic acids. Different animal species have different complements of AOX genes. The two extremes are represented in humans and rodents; whereas the human genome contains a single active gene (AOX1), those of rodents, such as mice, are endowed with four genes (Aox1-4), clustering on the same chromosome, each encoding a functionally distinct AOX enzyme. It still remains enigmatic why some species have numerous AOX enzymes, whereas others harbor only one functional enzyme. At present, little is known about the physiological relevance of AOX enzymes in humans and their additional forms in other mammals. These enzymes are expressed in the liver and play an important role in the metabolisms of drugs and other xenobiotics. In this review, we discuss the expression, tissue-specific roles, and substrate specificities of the different mammalian AOX enzymes and highlight insights into their physiological roles.




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Stifling the Media: Barriers to Press Freedom

Under 35s Forum

20 May 2014 - 6:30pm to 7:30pm

Chatham House, London

Event participants

Yavuz Baydar, Columnist, Today's Zaman; Co-Founder, P24, Platform for Independent Journalism; Recipient, Special Award of the European Press Prize 
James Deane, Director of Policy and Learning, BBC Media Action
Kirsty Hughes, Writer; Chief Executive, Index on Censorship (2012-14)
Chair: John Lloyd, Contributing Editor, Financial Times; Director of Journalism, Reuters Institute for the Study of Journalism

From intimidation to restrictive laws and curbs on information, media outlets and individual journalists face a variety of threats to maintaining their independence and integrity in print and online. The panel will outline key challenges to international media freedoms, and Yavuz Baydar will share his experiences as a journalist in Turkey, a country that has faced growing criticism from the international community following a crackdown on social media sites, an increased pressure on its press and high numbers of detained journalists. 

LIVE STREAM: This event will be live streamed for members only. The live stream will be made available here at 18:30 BST on Tuesday 20 May.

ASK A QUESTION: Send questions for the speakers by email to questions@chathamhouse.org or using #askCH on Twitter. A selection will be put to them during the event.

This event will be followed by a reception.

This is an Under 35s Forum event.

Event attributes

Livestream




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Challenges to Freedom of Expression

Research Event

20 July 2016 - 6:00pm to 7:15pm

Chatham House, London

Event participants

Sherif Elsayed-Ali, Head of Technology and Human Rights, Amnesty International
Professor David Kaye, UN Special Rapporteur on the Promotion and Protection of the Right to Freedom of Opinion and Expression
Chair: Sonya Sceats, Associate Fellow, International Law Programme, Chatham House

The digital age has seen an extraordinary transformation in how individuals can exercise their right to freedom of expression. What are the proper limits of state interference in online communication in pursuit of national security and public order? What does this mean for privacy? And away from the digital world, to what extent is free speech being affected by counterterrorism measures and actions to prevent hate crimes? How do all of these challenges affect the space for civil society action?

Chanu Peiris

Programme Manager, International Law
+44 (0)20 7314 3686




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Make It Awesome — Three Tips for Impressing Your Readers

You’re a fantasy writer. You’ve created an amazing and original world, full of wondrous magic, mind-blowing monsters, and fascinating new cultures. You’ve got powerful heroes, menacing villains, and mysterious mentors. There’s just the right amount of romance.

In short, you’ve got all that good stuff you’d expect to find in a fantasy novel.

Only, somehow it’s still not coming out quite as awe-inspiring as you’d envisioned it.

Today, I’ve got three tips for you on how to make your awesome stuff seem more awesome.

Establish the Norm

“When everything is awesome, awesome becomes average.”

Every now and then, I come across a book that begins with the writer very obviously trying to impress me with how cool their main character is, and what an amazing world they have created, and how scary the villain is. All at once. In the first chapter.

It rarely works.

Let’s say there’s a ballroom full of ultra-rich and mega-powerful vampires, and then someone flies in on a golden unicorn and starts shooting fireballs the shape of grinning skulls.

That would probably look rather spectacular as an introduction to a movie, but does it work in a book?

Continue reading Make It Awesome — Three Tips for Impressing Your Readers at Mythic Scribes.



  • Writing Craft & Technique

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Gene expression regulation by retinoic acid

James E. Balmer
Nov 1, 2002; 43:1773-1808
Reviews




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Adipose differentiation-related protein is an ubiquitously expressed lipid storage droplet-associated protein

DL Brasaemle
Nov 1, 1997; 38:2249-2263
Articles




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Role of the peroxisome proliferator-activated receptor (PPAR) in mediating the effects of fibrates and fatty acids on gene expression

K Schoonjans
May 1, 1996; 37:907-925
Reviews




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Virtual Roundtable: The End of Globalism? Remaining Interconnected While Under Increased Pressure to Isolate

Invitation Only Research Event

30 March 2020 - 1:00pm to 2:00pm

Zoom Audio Call

Event participants

Fred Hochberg, Chairman and President, Export-Import Bank of the United States, 2009 -17
Chair: Dr Leslie Vinjamuri, Director, US and the Americas Programme, Chatham House

This event is part of the Chatham House Global Trade Policy Forum. We would like to take this opportunity to to thank founding partner AIG and supporting partners Clifford Chance LLP, Diageo plc and EY for their generous support of the forum. 

US and Americas Programme




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Egypt in 2018: Elections, Divisions and Suppression




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Equality by 2030: The Press for Progress




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GPIHBP1, a partner protein for lipoprotein lipase, is expressed only in capillary endothelial cells [Images In Lipid Research]




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Long noncoding RNA pncRNA-D reduces cyclin D1 gene expression and arrests cell cycle through RNA m6A modification [RNA]

pncRNA-D is an irradiation-induced 602-nt long noncoding RNA transcribed from the promoter region of the cyclin D1 (CCND1) gene. CCND1 expression is predicted to be inhibited through an interplay between pncRNA-D and RNA-binding protein TLS/FUS. Because the pncRNA-D–TLS interaction is essential for pncRNA-D–stimulated CCND1 inhibition, here we studied the possible role of RNA modification in this interaction in HeLa cells. We found that osmotic stress induces pncRNA-D by recruiting RNA polymerase II to its promoter. pncRNA-D was highly m6A-methylated in control cells, but osmotic stress reduced the methylation and also arginine methylation of TLS in the nucleus. Knockdown of the m6A modification enzyme methyltransferase-like 3 (METTL3) prolonged the half-life of pncRNA-D, and among the known m6A recognition proteins, YTH domain-containing 1 (YTHDC1) was responsible for binding m6A of pncRNA-D. Knockdown of METTL3 or YTHDC1 also enhanced the interaction of pncRNA-D with TLS, and results from RNA pulldown assays implicated YTHDC1 in the inhibitory effect on the TLS–pncRNA-D interaction. CRISPR/Cas9-mediated deletion of candidate m6A site decreased the m6A level in pncRNA-D and altered its interaction with the RNA-binding proteins. Of note, a reduction in the m6A modification arrested the cell cycle at the G0/G1 phase, and pncRNA-D knockdown partially reversed this arrest. Moreover, pncRNA-D induction in HeLa cells significantly suppressed cell growth. Collectively, these findings suggest that m6A modification of the long noncoding RNA pncRNA-D plays a role in the regulation of CCND1 gene expression and cell cycle progression.




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RNA helicase-regulated processing of the Synechocystis rimO-crhR operon results in differential cistron expression and accumulation of two sRNAs [Gene Regulation]

The arrangement of functionally-related genes in operons is a fundamental element of how genetic information is organized in prokaryotes. This organization ensures coordinated gene expression by co-transcription. Often, however, alternative genetic responses to specific stress conditions demand the discoordination of operon expression. During cold temperature stress, accumulation of the gene encoding the sole Asp–Glu–Ala–Asp (DEAD)-box RNA helicase in Synechocystis sp. PCC 6803, crhR (slr0083), increases 15-fold. Here, we show that crhR is expressed from a dicistronic operon with the methylthiotransferase rimO/miaB (slr0082) gene, followed by rapid processing of the operon transcript into two monocistronic mRNAs. This cleavage event is required for and results in destabilization of the rimO transcript. Results from secondary structure modeling and analysis of RNase E cleavage of the rimO–crhR transcript in vitro suggested that CrhR plays a role in enhancing the rate of the processing in an auto-regulatory manner. Moreover, two putative small RNAs are generated from additional processing, degradation, or both of the rimO transcript. These results suggest a role for the bacterial RNA helicase CrhR in RNase E-dependent mRNA processing in Synechocystis and expand the known range of organisms possessing small RNAs derived from processing of mRNA transcripts.




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Press Release: Largest international gathering on Biosafety meets in Bonn to finalize arrangements for the Cartagena Protocol.




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Press Release: International Community to Meet in Germany for a United Nations Conference on Living Modified Organisms and Biodiversity.




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Press release: Agreement reached to work towards a legally binding instrument on Liability and Redress with regard to GMOs.




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CBD News: Press release; Governments open meeting in Bonn to take action on declining biodiversity resources.




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CBD Press release: Germany and the United Nations Biodiversity Secretariat announce a "Green COP".




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CBD Press release: Biodiversity needed to feed the world, the International Day for Biological Diversity 22 May 2008.




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CBD Press Release: Governments and Organizations involved in Biosafety Capacity-Building Projects convene in Costa Rica.




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CBD News: Press Release - High-level Working Group on the Future of a Global Policy for Biodiversity and Ecosystems.




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CBD Press Release: The Green Wave for Biodiversity.




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CBD Press Release: Celebrating the International Day for Biological Diversity.




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CBD Press Release: Biodiversity - Time to See the Bigger Picture! A New Outreach Initiative Launches 5 June 2009.




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CBD News: Joint press-release by GEF and CBD on the approval by the GEF Council of a special initiative designed to build global awareness and catalyze decisive action during the upcoming 2010 International Year of Biodiversity (IYB).




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CBD Press Release: Canadian Launch of the Celebration for the 2010 International Year of Biodiversity.




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CBD Press Release: The Role of Indigenous and Local Communities in Protecting Life on Earth.




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CBD Press Release: Negotiations on An International Regime on Access to Genetic Resources and Benefit-Sharing to Continue in Montreal.




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CBD Press Release: Major Advances toward the Nagoya International Regime on Access and Benefit-Sharing.




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CBD Press Release: Celebrating the 150th anniversary of On the Origin of Species and the launch of the UK partnership supporting Biodiversity is Life - the International Year of Biodiversity 2010.




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CBD Press Release: Understanding Forest Ecosystems is Key for Successful Climate-Change Mitigation.




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CBD Press Release: Ocean Acidification from CO2 Emissions Causes Substantial Irreversible Damage to Ocean Ecosystems.




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CBD Press Release: Curitiba, One of the Greenest Cities in the World, Celebrates the International Year of Biodiversity.




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CBD Press Release: German Chancellor Angela Merkel and UN Secretary-General Ban Ki-moon officially launch the International Year of Biodiversity.




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CBD Press Release: Aichi-Nagoya, the Host Region of the Next Conference of Parties, Celebrates the International Year of Biodiversity.




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CBD News: UNESCO/Convention on Biological Diversity Press Release: Preserving Biodiversity: A Vital Challenge.




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CBD Press Release: Secretariat Launches a Practical Guide on How to Integrate Protected Areas into Wider Landscapes, Seascapes and Sectors.




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CBD News: Press Release - New Report: Traditional Aboriginal Knowledge Key to Boreal Forest Conservation United Nations Initiative Recognizes Boreal's Global Importance.




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CBD UN Press Release: Japanese Singer Misia Appointed Honorary Ambassador for Tenth Conference of Parties to UN Convention on Biodiversity, in Nagoya, 18-29 October.




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CBD Press Release: United Nations Secretary-General Appoints the Japanese Singer MISIA as Honorary Ambassador for the 2010 United Nations Biodiversity Conference.




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CBD Press Release: The Government of Finland Announces International Support for Sustaining Biodiversity in Association with the Life Web Initiative.




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CBD Press Release: Talks Begin to Finalize the International Regime on Access and Benefit-Sharing of the Earth's Genetic Resources.




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CBD Press Release: Japan Approves Fourth National Biodiversity Strategy.




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CBD Press Release: On World Water Day, United Nations Report Demonstrates Role of Forests and Wetlands for Clean Water and A Healthy World.