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Evolving the naturally compromised chorismate mutase from Mycobacterium tuberculosis to top performance [Protein Structure and Folding]

Chorismate mutase (CM), an essential enzyme at the branch-point of the shikimate pathway, is required for the biosynthesis of phenylalanine and tyrosine in bacteria, archaea, plants, and fungi. MtCM, the CM from Mycobacterium tuberculosis, has less than 1% of the catalytic efficiency of a typical natural CM and requires complex formation with 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase for high activity. To explore the full potential of MtCM for catalyzing its native reaction, we applied diverse iterative cycles of mutagenesis and selection, thereby raising kcat/Km 270-fold to 5 × 105 m−1s−1, which is even higher than for the complex. Moreover, the evolutionarily optimized autonomous MtCM, which had 11 of its 90 amino acids exchanged, was stabilized compared with its progenitor, as indicated by a 9 °C increase in melting temperature. The 1.5 Å crystal structure of the top-evolved MtCM variant reveals the molecular underpinnings of this activity boost. Some acquired residues (e.g. Pro52 and Asp55) are conserved in naturally efficient CMs, but most of them lie beyond the active site. Our evolutionary trajectories reached a plateau at the level of the best natural enzymes, suggesting that we have exhausted the potential of MtCM. Taken together, these findings show that the scaffold of MtCM, which naturally evolved for mediocrity to enable inter-enzyme allosteric regulation of the shikimate pathway, is inherently capable of high activity.




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Mycobacterium tuberculosis infection up-regulates MFN2 expression to promote NLRP3 inflammasome formation [Cell Biology]

Tuberculosis (TB), caused by the infection of Mycobacterium tuberculosis (MTB), is one of the leading causes of death worldwide, especially in children. However, the mechanisms by which MTB infects its cellular host, activates an immune response, and triggers inflammation remain unknown. Mitochondria play important roles in the initiation and activation of the nucleotide-binding oligomerization domain-like receptor with a pyrin domain 3 (NLRP3) inflammasome, where mitochondria-associated endoplasmic reticulum membranes (MAMs) may serve as the platform for inflammasome assembly and activation. Additionally, mitofusin 2 (MFN2) is implicated in the formation of MAMs, but, the roles of mitochondria and MFN2 in MTB infection have not been elucidated. Using mircroarry profiling of TB patients and in vitro MTB stimulation of macrophages, we observed an up-regulation of MFN2 in the peripheral blood mononuclear cells of active TB patients. Furthermore, we found that MTB stimulation by MTB-specific antigen ESAT-6 or lysate of MTB promoted MFN2 interaction with NLRP3 inflammasomes, resulting in the assembly and activation of the inflammasome and, subsequently, IL-1β secretion. These findings suggest that MFN2 and mitochondria play important role in the pathogen-host interaction during MTB infection.




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The anti-tubercular activity of simvastatin is mediated by cholesterol-driven autophagy via the AMPK-mTORC1-TFEB axis

Natalie Bruiners
Dec 1, 2020; 61:1617-1628
Research Articles




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The anti-tubercular activity of simvastatin is mediated by cholesterol-driven autophagy via the AMPK-mTORC1-TFEB axis [Research Articles]

The rise of drug-resistant tuberculosis poses a major risk to public health. Statins, which inhibit both cholesterol biosynthesis and protein prenylation branches of the mevalonate pathway, increase anti-tubercular antibiotic efficacy in animal models. However, the underlying molecular mechanisms are unknown. In this study, we used an in vitro macrophage infection model to investigate simvastatin’s anti-tubercular activity by systematically inhibiting each branch of the mevalonate pathway and evaluating the effects of the branch-specific inhibitors on mycobacterial growth. The anti-tubercular activity of simvastatin used at clinically relevant doses specifically targeted the cholesterol biosynthetic branch rather than the prenylation branches of the mevalonate pathway. Using Western blot analysis and AMP/ATP measurements, we found that simvastatin treatment blocked activation of mechanistic target of rapamycin complex 1 (mTORC1), activated AMP-activated protein kinase (AMPK) through increased intracellular AMP:ATP ratios, and favored nuclear translocation of transcription factor EB (TFEB). These mechanisms all induce autophagy, which is anti-mycobacterial. The biological effects of simvastatin on the AMPK-mTORC1-TFEB-autophagy axis were reversed by adding exogenous cholesterol to the cells. Our data demonstrate that the anti-tubercular activity of simvastatin requires inhibiting cholesterol biosynthesis, reveal novel links between cholesterol homeostasis, the AMPK-mTORC1-TFEB axis, and Mycobacterium tuberculosis infection control, and uncover new anti-tubercular therapy targets.




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Tuberculosis: Disruption to health services from pandemic has allowed cases to reach record levels worldwide




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DPH Observes World Tuberculosis (TB) Day on March 24

The Delaware Division of Public Health (DPH) will join health organizations and advocates around the globe to recognize World Tuberculosis (TB) Day on Sunday, March 24. This day commemorates Dr. Robert Koch’s groundbreaking discovery of Mycobacterium tuberculosis and is used to raise awareness and increase education about the threat of TB. DPH’s Tuberculosis Elimination and […]



  • Delaware Health and Social Services
  • Division of Public Health
  • News
  • Awele Maduka-Ezeh
  • Delaware Division of Public Health
  • DPH
  • Office of Infectious Disease Epidemiology
  • OIDE
  • Tara Jenkins
  • Tuberculosis Elimination and Control Branch

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Shorts Break By Armoks Media Becomes #1 YouTube Creator In India For Shorts

Youtube has released its annual A YEAR ON YOUTUBE list for 2022, and there is some explosive news coming in from the house of Armoks Media. Shorts Break from Armoks Media has become the #1 Youtube Creator for Shorts videos in India, as their video: Baarish me Bheegna has been ranked #1 in their list.  […]




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Android users spot a TikTok-style swipe on YouTube’s horizontal videos

YouTube might be testing a swipe-up gesture in its horizontal video player, but users aren't thrilled.




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High risk of tuberculosis in SA children under ten – study




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to youtube videos manually

to youtube videos manually




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Ancient humans lived inside a lava tube in the Arabian desert

Underground tunnels created by lava flows provided humans with shelter for thousands of years beneath the hot desert landscape of Saudi Arabia




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'Alarming' Rise Seen in Drug-Resistant Tuberculosis

Title: 'Alarming' Rise Seen in Drug-Resistant Tuberculosis
Category: Health News
Created: 8/30/2012 2:05:00 PM
Last Editorial Review: 8/31/2012 12:00:00 AM




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Newer Breathing Tube Might Save More Cardiac Arrest Patients

Title: Newer Breathing Tube Might Save More Cardiac Arrest Patients
Category: Health News
Created: 8/29/2018 12:00:00 AM
Last Editorial Review: 8/30/2018 12:00:00 AM




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Looking for Reliable Hay Fever Advice? It's Probably Not on YouTube

Title: Looking for Reliable Hay Fever Advice? It's Probably Not on YouTube
Category: Health News
Created: 8/16/2022 12:00:00 AM
Last Editorial Review: 8/16/2022 12:00:00 AM




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The treatment of latent tuberculosis infection in migrants in primary care versus secondary care

Extract

With a disproportionate burden of tuberculosis (TB) amongst migrants in Europe [1], Burman et al. [2] have highlighted the pressing need for alternative approaches to make TB infection (TBI) screening comprehensive and accessible. Across high-income Organisation for Economic Co-operation and development countries, a median of 52% of TB cases occur in foreign-born individuals, who are at their highest risk of developing TB disease within the first 5 years of migration [3]. Molecular epidemiological studies indicate that the majority of these cases occur as a result of TBI reactivation, often acquired overseas [4]. Within the UK, overseas-born migrants have a 14-fold higher TB incidence than UK-born individuals [5]. The World Health Organization therefore recommends that migrants from countries with a high TB burden may be prioritised for TBI screening [6, 7].




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Accuracy of CAD4TB (Computer-Aided Detection for Tuberculosis) on paediatric chest radiographs

Background

Computer-aided detection (CAD) systems hold promise for improving tuberculosis (TB) detection on digital chest radiographs. However, data on their performance in exclusively paediatric populations are scarce.

Methods

We conducted a retrospective diagnostic accuracy study evaluating the performance of CAD4TBv7 (Computer-Aided Detection for Tuberculosis version 7) using digital chest radiographs from well-characterised cohorts of Gambian children aged <15 years with presumed pulmonary TB. The children were consecutively recruited between 2012 and 2022. We measured CAD4TBv7 performance against a microbiological reference standard (MRS) of confirmed TB, and also performed Bayesian latent class analysis (LCA) to address the inherent limitations of the MRS in children. Diagnostic performance was assessed using the area under the receiver operating characteristic curve (AUROC) and point estimates of sensitivity and specificity.

Results

A total of 724 children were included in the analysis, with confirmed TB in 58 (8%), unconfirmed TB in 145 (20%) and unlikely TB in 521 (72%). Using the MRS, CAD4TBv7 showed an AUROC of 0.70 (95% CI 0.60–0.79), and demonstrated sensitivity and specificity of 19.0% (95% CI 11–31%) and 99.0% (95% CI 98.0–100.0%), respectively. Applying Bayesian LCA with the assumption of conditional independence between tests, sensitivity and specificity estimates for CAD4TBv7 were 42.7% (95% CrI 29.2–57.5%) and 97.9% (95% CrI 96.6–98.8%), respectively. When allowing for conditional dependence between culture and Xpert assay, CAD4TBv7 demonstrated a sensitivity of 50.3% (95% CrI 32.9–70.0%) and specificity of 98.0% (95% CrI 96.7–98.9%).

Conclusion

Although CAD4TBv7 demonstrated high specificity, its suboptimal sensitivity underscores the crucial need for optimisation of CAD4TBv7 for detecting TB in children.




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Treatment of latent tuberculosis infection in migrants in primary care versus secondary care

Background

Control of latent tuberculosis infection (LTBI) is a priority in the World Health Organization strategy to eliminate TB. Many high-income, low TB incidence countries have prioritised LTBI screening and treatment in recent migrants. We tested whether a novel model of care, based entirely within primary care, was effective and safe compared to secondary care.

Methods

This was a pragmatic cluster-randomised, parallel group, superiority trial (ClinicalTrials.gov: NCT03069807) conducted in 34 general practices in London, UK, comparing LTBI treatment in recent migrants in primary care to secondary care. The primary outcome was treatment completion, defined as taking ≥90% of antibiotic doses. Secondary outcomes included treatment acceptance, adherence, adverse effects, patient satisfaction, TB incidence and a cost-effectiveness analysis. Analyses were performed on an intention-to-treat basis.

Results

Between September 2016 and May 2019, 362 recent migrants with LTBI were offered treatment and 276 accepted. Treatment completion was similar in primary and secondary care (82.6% versus 86.0%; adjusted OR (aOR) 0.64, 95% CI 0.31–1.29). There was no difference in drug-induced liver injury between primary and secondary care (0.7% versus 2.3%; aOR 0.29, 95% CI 0.03–2.84). Treatment acceptance was lower in primary care (65.2% (146/224) versus 94.2% (130/138); aOR 0.10, 95% CI 0.03–0.30). The estimated cost per patient completing treatment was lower in primary care, with an incremental saving of GBP 315.27 (95% CI 313.47–317.07).

Conclusions

The treatment of LTBI in recent migrants within primary care does not result in higher rates of treatment completion but is safe and costs less when compared to secondary care.




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YouTube Beauty Stylist Andrea Brooks Reveals Holiday Party Beauty Tips in Latest Colgate� Optic White� Smile Show� Episode �� - Video Sneak-Peek

Exclusive sneak-peek of how Andrea gets her #BrilliantSmile holiday ready in Episode 7 of The Smile Show.




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Anti-Dumping Duty Imposed on Welded Stainless-Steel Pipes and Tubes from Thailand and Vietnam

GOVERNMENT OF INDIA MINISTRY OF FINANCE (DEPARTMENT OF REVENUE)




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Xavier Yamada's Satori Inu 4-Panel Manga Gets Short Anime on YouTube

Toshiyuki Morikawa stars as titular dog in 12 episodes now streaming




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Почему венчурная Россия не Америка? На примере Rutube

Алексей Леонидович Траньков зашёл с козырей при описании Rutube и сравнении его с YouTube, озвучив тезис, что хорошие проекты не рождаются по указке, а на любой хороший проект тут же собираются желающие побить себя в грудь с воплями «мы, мы, мы!», а вот в Америке не так, там всё по уму, и всех закидывают баблом. В тексте было несколько кажущихся мне спорными моментов, в частности, расцвет Rutube увязывается с президентством Медведева (Rutube был запущен в 2006-м), и то, что Rutube был обречён на успех. Проще всего спросить об этом у Михаила Паулкина, основателя Rutube.




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Team criticised for picking YouTube star as striker

Argentine side Deportivo Riestra are accused of a "lack of respect" after picking a YouTube star as a striker in a top-flight match.




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New Nasal Spray Could Be a Breakthrough in Treating Brain Tuberculosis

For the first time, scientists have devised an innovative method to deliver tuberculosis (TB) (!--ref1--) medication directly to the brain through the nasal route.




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YouTube's Impact on Breast Cancer Awareness

Lecturers at the Faculty of Social and Communication Sciences of the University of the Basque Country/Euskal Herriko University (UPV/EHU) analyzed a playlist




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YouTube Channel Enhances 'Competence Building' for Remote Area Doctors

The Uttar Pradesh health department has adopted YouTube as a platform for ongoing medical education and professional development of government doctors stationed in remote areas (!--ref1--).





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HIV Antibody Response Raised in Patients With Tuberculosis Disease

medlinkHIV/medlink patients with pulmonary tuberculosis had broader and more potent HIV antibodies compared to those without suspected or documented




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Promising Tuberculosis Therapy for HIV-positive Patients

A promising new therapy for medlinktuberculosis/medlink (TB) has been shown to be compatible with combined antiretroviral therapy (cART), stated research




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'Test-Tube Baby' Pioneer Edwards Gets Nobel in Medicine

It may have come a bit too late, but a very deserving Robert Edwards has finally been awarded the Nobel Prize in Medi




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Decorating your house delicately with China tube led light

Home lighting decoration becoming a part of modern living environment has drawn increasing attention. Home lighting can render a good home environment and outstanding design features for our lives to create a warm ambience. It is easy when...




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Adobe Acquires Video Advertising Platform Tubemogul

Software major Adobe on Friday announced it has acquired video advertising platform TubeMogul for nearly $540 million.




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YouTube Adds AI Brainstorming, Veo Video Creation, and Digital Gifts for Livestreams

YouTube has announced a major update for content creators, bringing a host of new AI-powered tools that are set to reshape video production on the platform. The announcement came at the Made on YouTube event in New York City, where the




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Youtube Shorts Are Getting Longer—From 60 Seconds to 3 Minutes

YouTube has announced an update to YouTube Shorts, making it easier and more fun for creators. YouTube has confirmed it is extending the ability to create longer vertical videos. This has come after many creators asked YouTube to allow them to




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YouTube Clarifies Changes to Ad Skipping—No, They're Not Removing the Button

In recent weeks, some YouTube users have voiced concerns that the platform is making it more difficult to skip ads, with reports circulating about black rectangles obscuring the skip button. These claims surfaced on Reddit, and users reported a lack of




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YouTube New Features: Precise Playback Speed Controls and Sleep Timer Introduced in Latest Update

YouTube is introducing several updates, seemingly inspired by user suggestions. One of the notable changes is the ability to adjust playback speed in smaller increments of 0.05, compared to the previous 0.25 steps. However, the maximum speed remains capped at 2x.




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Bollywood News Live: मलाइका ने अर्जुन कपूर को बताया जहरीला? अल्लू अर्जुन के फैंस का YouTube के बाहर बवाल

Bollywood Latest News in Hindi Today: मनोरंजन की दुनिया में आए दिन कुछ ना कुछ लगा ही रहता है। अगर आप भी सितारों के बारे में जानना चाहते हैं तो फटाफट जुड़ें फिल्मी बीट की लाइव न्यूज से। जहां




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Elon Musk’s X Is Launching a TV App Similar to YouTube for Watching Videos

Social media giant X (formerly Twitter) is making a bold move into the video streaming landscape with the announcement of a brand new TV app. This app signifies a strategic shift for X, placing video content at the forefront and aiming




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MrBeast Wins YouTube! Claims Top Spot with Over 269 Million Subscribers

Jimmy Donaldson, known to many as MrBeast, has reached a new milestone. His YouTube channel now has over 269 million subscribers, surpassing T-Series, which has about 266 million. This marks a significant achievement in the online world. Donaldson made the announcement




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Your Favorite YouTubers Can Now Turn Their Videos into Shopping Malls

YouTube has officially launched YouTube Shopping in India, a feature designed to expand revenue opportunities for video creators by integrating e-commerce directly into their content.   Building on the success of similar launches in markets like South Korea and the U.S.,




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Klio hat jetzt Internet : Historische Narrative auf Youtube - Darstellung, Inszenierung, Aushandlung [Electronic book] / hrsg. von Kilian Baur, Robert Trautmannsberger.

München ; Wien : De Gruyter Oldenbourg, [2023]




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Highly homogeneous and stable single-walled carbon nanotubes dispersion modified by polyvinylpyrrolidone and alkanolamine in water

RSC Adv., 2024, 14,12947-12953
DOI: 10.1039/D4RA01614A, Paper
Open Access
Minghua Li, Shujun Yu, Xiting Fang, Zhiqiang Du, Xiaojin Ge
An easy green non-covalent surface functionalization of pristine SWCNT was carried out by using ball grinding technology, resulting in the formation of a highly homogeneous and stable PA-SWCNTs dispersion reported firstly in water.
The content of this RSS Feed (c) The Royal Society of Chemistry




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Synthesis of Asymmetric Imine Polymers for Highly Selective Sorting of Semiconducting Single-Walled Carbon Nanotubes by Two in One Strategy

Polym. Chem., 2024, Accepted Manuscript
DOI: 10.1039/D4PY00607K, Paper
Ying Zhang, Yu Li, Yuchi Wan, Jun-Hao Wang, Yunzhen Chang, Sheng Zhu, Lan Bai, Yu Cao, Xuelei Liang, Gaoyi Han
By two in one strategy, we get three polymers of fluorene derivative with asymmetric structure functionalized with two types of arenes with different orientation and electronic properties. The polymers are...
The content of this RSS Feed (c) The Royal Society of Chemistry




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Mitigating intubation stress, mucosa injury, and inflammatory response in nasogastric tube intubation via suppression of the NF-κB signaling pathway by engineering a hydration lubrication coating

J. Mater. Chem. B, 2024, Advance Article
DOI: 10.1039/D4TB01171F, Paper
Xi Liao, Meng-Han Bai, Yu-Wei Liu, Yu-Qing Wei, Jun-Yang Wang, Zhi-Guo Wang, Rui Hong, Ju-Xiang Gou, Jia-Zhuang Xu, Zhong-Ming Li, Ka Li
The hydrated micelle coating, composed of hyaluronic acid and Pluronic, demonstrated superior hydrophilicity and aqueous lubricity to effectively alleviate mucosal lesions and inflammation caused by NGT insertion.
To cite this article before page numbers are assigned, use the DOI form of citation above.
The content of this RSS Feed (c) The Royal Society of Chemistry





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Amidst tubers, roots in a rural set up



  • A J Vinayak

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Crystallographic models of ribbons and ribbon-based J-aggregate nanotubes from the geometry of tube ends

Phys. Chem. Chem. Phys., 2024, Advance Article
DOI: 10.1039/D4CP03559C, Paper
Valery V. Prokhorov, Kirill A. Prusakov, Sergey I. Pozin, Olga M. Perelygina, Eugene I. Mal’tsev, Alexander A. Nekrasov
We propose the procedure of establishing the crystal structure of ribbons and ribbon-based tubes on the basis of crystallographic analysis of the tube-end geometry.
To cite this article before page numbers are assigned, use the DOI form of citation above.
The content of this RSS Feed (c) The Royal Society of Chemistry




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Annealing approach to form a nanotube from graphdiyne ribbon: A theoretical prediction

Phys. Chem. Chem. Phys., 2024, Accepted Manuscript
DOI: 10.1039/D4CP03573A, Paper
Bo Song, Kun Cai, Jiao Shi, Qinghua Qin
A precisely controllable heat treatment process is critical for nanofabrication. We developed a two-step method to fabricate a graphdiyne nanotube (GNT) through heat treatment in an argon environment. Initially, we...
The content of this RSS Feed (c) The Royal Society of Chemistry




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Effect of Functionalized Multiwalled Carbon Nanotubes on Mechanical, Swelling and Viscoelastic Properties on Gum ghatti-cl-poly(NIPAm) Hydrogels

New J. Chem., 2024, Accepted Manuscript
DOI: 10.1039/D4NJ01677G, Paper
Pragnesh N Dave, Pradip Macwan
The present work involves the Gum ghatti-cl-poly(NIPAm)/-o-MWCNT (GGNIPACNT) hydrogels via free radical polymerization technique. The synthesized hydrogels were characterized by FTIR analysis which suggested the successful binding of -o-MWCNT in...
The content of this RSS Feed (c) The Royal Society of Chemistry




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Sulfonic groups modified carbon nanotubes: the decorative strategy for enhancing the performance of lithium-sulfur batteries

New J. Chem., 2024, Accepted Manuscript
DOI: 10.1039/D4NJ00927D, Communication
Chensong Yang, Yakun Tang, Yue Zhang, Xingyan Zeng, Mengyao Dai, Lang Liu
Porous carbon nanotubes can not only provide a large surface area for anchoring sulfur and restraining polysulfides, but also provide continuous conductive networks to facilitate ion transport in lithium-sulfur batteries...
The content of this RSS Feed (c) The Royal Society of Chemistry




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Ultrasound-assisted ionic liquid-mediated green method for synthesis of 1,3-diphenylpyrazole-based spirooxindolopyrrolizidines, their anti-tubercular activity, molecular docking study and ADME predictions

New J. Chem., 2024, Accepted Manuscript
DOI: 10.1039/D4NJ00563E, Paper
Sravanthi Baddepuri, G. Rama Krishna, Jyothi Kumari, Sriram Dharmarajan, Srinivas Basavoju
The aim of the study is to develop the synthesis of a novel series of potent anti-tubercular (anti-TB) activity of 1,3-diphenylpyrazole-based spirooxindolopyrrolizidine derivatives via an efficient green approach achieved by...
The content of this RSS Feed (c) The Royal Society of Chemistry