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Nanodomains can persist at physiologic temperature in plasma membrane vesicles and be modulated by altering cell lipids [Research Articles]

The formation and properties of liquid-ordered (Lo) lipid domains (rafts) in the plasma membrane are still poorly understood. This limits our ability to manipulate ordered lipid domain-dependent biological functions. Giant plasma membrane vesicles (GPMVs) undergo large-scale phase separations into coexisting Lo and liquid-disordered lipid domains. However, large-scale phase separation in GPMVs detected by light microscopy is observed only at low temperatures. Comparing Förster resonance energy transfer-detected versus light microscopy-detected domain formation, we found that nanodomains, domains of nanometer size, persist at temperatures up to 20°C higher than large-scale phases, up to physiologic temperature. The persistence of nanodomains at higher temperatures is consistent with previously reported theoretical calculations. To investigate the sensitivity of nanodomains to lipid composition, GPMVs were prepared from mammalian cells in which sterol, phospholipid, or sphingolipid composition in the plasma membrane outer leaflet had been altered by cyclodextrin-catalyzed lipid exchange. Lipid substitutions that stabilize or destabilize ordered domain formation in artificial lipid vesicles had a similar effect on the thermal stability of nanodomains and large-scale phase separation in GPMVs, with nanodomains persisting at higher temperatures than large-scale phases for a wide range of lipid compositions. This indicates that it is likely that plasma membrane nanodomains can form under physiologic conditions more readily than large-scale phase separation. We also conclude that membrane lipid substitutions carried out in intact cells are able to modulate the propensity of plasma membranes to form ordered domains. This implies lipid substitutions can be used to alter biological processes dependent upon ordered domains.




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Long noncoding RNA pncRNA-D reduces cyclin D1 gene expression and arrests cell cycle through RNA m6A modification [RNA]

pncRNA-D is an irradiation-induced 602-nt long noncoding RNA transcribed from the promoter region of the cyclin D1 (CCND1) gene. CCND1 expression is predicted to be inhibited through an interplay between pncRNA-D and RNA-binding protein TLS/FUS. Because the pncRNA-D–TLS interaction is essential for pncRNA-D–stimulated CCND1 inhibition, here we studied the possible role of RNA modification in this interaction in HeLa cells. We found that osmotic stress induces pncRNA-D by recruiting RNA polymerase II to its promoter. pncRNA-D was highly m6A-methylated in control cells, but osmotic stress reduced the methylation and also arginine methylation of TLS in the nucleus. Knockdown of the m6A modification enzyme methyltransferase-like 3 (METTL3) prolonged the half-life of pncRNA-D, and among the known m6A recognition proteins, YTH domain-containing 1 (YTHDC1) was responsible for binding m6A of pncRNA-D. Knockdown of METTL3 or YTHDC1 also enhanced the interaction of pncRNA-D with TLS, and results from RNA pulldown assays implicated YTHDC1 in the inhibitory effect on the TLS–pncRNA-D interaction. CRISPR/Cas9-mediated deletion of candidate m6A site decreased the m6A level in pncRNA-D and altered its interaction with the RNA-binding proteins. Of note, a reduction in the m6A modification arrested the cell cycle at the G0/G1 phase, and pncRNA-D knockdown partially reversed this arrest. Moreover, pncRNA-D induction in HeLa cells significantly suppressed cell growth. Collectively, these findings suggest that m6A modification of the long noncoding RNA pncRNA-D plays a role in the regulation of CCND1 gene expression and cell cycle progression.




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euromicron involved in modernizing the campus of Kiel University

ssm euromicron GmbH, a system house subsidiary of euromicron AG, is involved in a project to provide the technical equipment for the new building for the Institute of Geosciences at Kiel’s Christian Albrechts University. The seven-story new building is part of a campus-wide modernization initiative that is one of the largest public high-rise projects in the federal state of Schleswig-Holstein.




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Some of the latest climate models provide unrealistically high projections of future warming

A new study from University of Michigan climate researchers concludes that some of the latest-generation climate models may be overly sensitive to carbon dioxide increases and therefore project future warming that is unrealistically high.




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How modelling articulates the science of climate change

To imagine earth without greenhouse gases in its atmosphere is to turn the familiar blue marble into a barren lump of rock and ice on which the average surface temperature hovers around -18ºC. Such a planet would not receive less of the sunlight which is the ultimate source of all Earth's warmth. But when the energy it absorbed from the sunlight was re-emitted as infrared radiation, as the laws of physics require, it would head unimpeded back out into space.




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Press Release: International Community to Meet in Germany for a United Nations Conference on Living Modified Organisms and Biodiversity.




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Launch of the Website of the Online Survey on the Application of and Experience in the Use of Socio-Economic Considerations in Decision-Making on Living Modified Organisms




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New Publication: Brochure on the Cartagena Protocol on Biosafety: Reducing the environmental risks of modern technology




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Report of the Workshop on Capacity-building for research and information exchange on socio-economic impacts of Living Modified Organisms under the Cartagena Protocol on Biosafety




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Online Forum on Public Awareness, Education and Participation Concerning the Safe Transfer, Handling and Use of Living Modified Organisms (4 - 18 June 2012)




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Report of the Africa Regional Capacity-building Workshop on Public Awareness, Education and Participation concerning the Safe Transfer, Handling and Use of Living Modified Organisms




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The report of the workshop of the Network of Laboratories for the Detection and Identification of Living Modified Organisms is now available.




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The report of the GRULAC Workshop on the Detection and Identification of Living Modified Organisms is available.




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The report of the workshop on developing capacity for national border controls on living modified organisms in small island developing States in the Caribbean is available.




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Two new biosafety self-paced learning modules on public access to biosafety information and public participation in decision-making regarding LMOs are available in the new e-Learning Platform




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The report of the second joint Aarhus Convention/CBD round table on public awareness, access to information and public participation regarding living modified organisms (LMOs)/genetically modified organisms (GMOs) is available.




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The report of the workshop on developing capacity for national border controls on living modified organisms in Pacific small island developing States is now available.




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CBD News: Statement by Ahmed Djoghlaf, Executive Secretary of the Convention on Biological Diversity, to the International Model Forest Network Global Forum - 16-21 June 2008 - Alberta, Canada.




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CBD News: Message from Mr Ahmed Djoghlaf, Executive Secretary of the Convention on Biological Diversity, to the International Seminar "The Andalusí Experience: A Model for the Conservation of Biodiversity", 7 October 2009, Granada, Spain.




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CBD Press Release: A United Nations Conference on the Safe Use of Modern Biotechnology Opens Tomorrow




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CBD Press Release: The Nagoya - Kuala Lumpur Protocol on Liability and Redress for Damage Resulting from Living Modified Organisms born in Nagoya




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CBD Press Release: World Community Adopts a new UN Treaty on Living Modified Organisms




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CBD Press Release: A New International Treaty to Address Damage that may Result from Living Modified Organisms Opens for Signature.




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CBD Press Release: The International Treaty on Damage Resulting from Living Modified Organisms Receives Sixteen Signatures.




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CBD Press Release: International treaty on damage resulting from living modified organisms receives four new signatures




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CBD Communiqué: Modus operandi agreed by Rio conventions




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CBD Communiqué: City of Edmonton a model of local government support for the CBD




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CBD Press Release: The UN Meeting on Biosafety Ends with An Agreement to Advance Work on the Issue of Socioeconomic Considerations Regarding Living Modified Organisms




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CBD News: An informal meeting for government experts and relevant stakeholders to discuss model contractual clauses, voluntary codes of conduct, guidelines and best practices and/or standards, as set out in Articles 19 and 20 of the Nagoya Protocol on Acc




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CBD News: Under the theme, 10 Years of Promoting Safety in the Use of Biotechnology, the international community is marking the tenth anniversary of the entry into force of the international agreement governing the movement of living modified organisms (L




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CBD Communiqué: Meeting on the Safe Use of Living Modified Organisms - First of three major United Nations meetings opens Monday




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CBD News: Governments attending a United Nations meeting on the safe use of living modified organisms have agreed on various actions to advance the implementation of the Cartagena Protocol on Biosafety to the Convention on Biological Diversity




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CBD News: The GBIF Secretariat has launched the inaugural GBIF Ebbe Nielsen Challenge, hoping to inspire innovative applications of open-access biodiversity data by scientists, informaticians, data modelers, cartographers and other experts competing for a




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CBD News: Fifteen years ago, the Cartagena Protocol on Biosafety to the Convention on Biological Diversity entered into force aiming to ensure the safe handling, transfer and use of living modified organisms (or LMOs) resulting from modern biotechnology.




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CBD Notification SCBD/CPU/DC/MA/MW/88481 (2019-103): Nomination of Experts to the Western, Central and Eastern Asian Training Course on Risk Assessment of Living Modified Organisms, 13-17 April 2020 - Ulaanbaatar, Mongolia




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CBD Notification SCBD/SSSF/AS/SBG/JA/JG/88518 (2019-107): Expert Workshop to Identify Options for Modifying the Description of Ecologically or Biologically Significant Marine Areas (EBSAs) and Describing New EBSAs, 3 to 5 February 2020 - Brussels, Belgium





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Developer models COVID-19 sneezing simulation on Gran Turismo software

A lone developer from the company that provided aerodynamic analysis for the cars in the PlayStation game Gran Turismo has applied the tooling to demonstrate the spread of germs with and without wearing a mask





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Calculation of the convexity adjustment to the forward rate in the Vasicek model for the forward in-arrears contracts on LIBOR rate

N. O. Malykh and I. S. Postevoy
Theor. Probability and Math. Statist. 99 (2020), 189-198.
Abstract, references and article information




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Asymptotic distribution of the maximum likelihood estimator in the fractional Vašíček model

S. S. Lohvinenko and K. V. Ralchenko
Theor. Probability and Math. Statist. 99 (2020), 149-168.
Abstract, references and article information




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Goodness-of-fit test in the Cox proportional hazards model with measurement errors

A. G. Kukush and O. O. Chernova
Theor. Probability and Math. Statist. 99 (2020), 125-135.
Abstract, references and article information




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Construction of the Karhunen–Loève model for an input Gaussian process in a linear system by using the output process

Yu. V. Kozachenko and I. V. Rozora
Theor. Probability and Math. Statist. 99 (2020), 113-124.
Abstract, references and article information





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Persistence and extinction in a stochastic nonautonomous logistic model of population dynamics

O. D. Borysenko and D. O. Borysenko
Theor. Probability and Math. Statist. 99 (2020), 67-75.
Abstract, references and article information




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Modified Euler scheme for the weak approximation of stochastic differential equations driven by the Wiener process

S. V. Bodnarchuk and O. M. Kulyk
Theor. Probability and Math. Statist. 99 (2020), 53-65.
Abstract, references and article information




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Classical solution of a PDE system stemming from auxin transport model for leaf venation

Bin Li and Jieqiong Shen
Proc. Amer. Math. Soc. 148 (2020), 2565-2578.
Abstract, references and article information




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A topology on the set of isomorphism classes of maximal Cohen–Macaulay modules

Naoya Hiramatsu and Ryo Takahashi
Proc. Amer. Math. Soc. 148 (2020), 2359-2369.
Abstract, references and article information




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Modeling COVID-19: A new video describing the types of models used

Below, Mac Hyman, Tulane University, talks about types of mathematical models--their strengths and weaknesses--the data that we currently have and what we really need, and what models can tell us about a possible second wave.

At the beginning of the video, he thanks the mathematics community for its work, and near the end says, "Our mathematical community is really playing a central role in helping to predict the spread, and help mitigate this epidemic, and prioritize our efforts. …Do not underestimate the power that mathematics can have in helping to mitigate this epidemic—-we have a role to play."

See the full set of videos on modeling COVID-19 and see media coverage of mathematics' role in modeling the pandemic.