die How to sniff out the good coronavirus studies from the bad By www.newscientist.com Published On :: Wed, 06 May 2020 15:35:41 +0000 With social media, newspapers and politicians all espousing unverified covid-19 findings, use these seven signs to tell if a study should be treated with caution Full Article
die San Diego opera singer swaps concert stage for front porch By feeds.reuters.com Published On :: Tue, 22 Aug 2017 17:05:37 -0400 Opera singer Victoria Robertson is accustomed to performing on stages much bigger than the five-foot wide front porch of her San Diego home. But with concert venues closed and work at a standstill due to the coronavirus pandemic, she decided to make the most of it. Full Article
die UPDATE 1-Union opposes reopening U.S. meat plants as more workers die By feeds.reuters.com Published On :: Fri, 08 May 2020 18:48:49 -0400 The largest union representing U.S. meatpacking workers said on Friday it opposed the reopening of plants as the Trump administration had failed to guarantee workers' safety. Full Article companyNews
die India's Bollywood star Rishi Kapoor, 67, dies of leukemia By www.reuters.com Published On :: Thu, 30 Apr 2020 03:42:51 -0400 Indian actor Rishi Kapoor, who starred in celebrated Bollywood movies such as "Bobby" and "Mera Naam Joker", died on Thursday after a two-year battle with leukemia, his family said. Full Article peopleNews
die Florian Schneider, Kraftwerk founder and electronic music pioneer, dies at 73 By www.reuters.com Published On :: Thu, 07 May 2020 00:53:27 -0400 Florian Schneider, co-founder of pioneering German electronic band Kraftwerk, which influenced generations of pop and dance musicians with mesmerising tracks such as "Autobahn", has died of cancer aged 73, longtime bandmate Ralf Huetter said. Full Article peopleNews
die Roy Horn of Las Vegas magic duo Siegfried and Roy dies of COVID-19: report By www.reuters.com Published On :: Sat, 09 May 2020 00:08:32 -0400 Magician Roy Horn, who alongside Siegfried Fischbacher starred in a popular, long-running Las Vegas act built around rare tigers, died on Friday from of complications of COVID-19, the Las Vegas Review-Journal newspaper reported. He was 75. Full Article peopleNews
die Rock 'n' roll pioneer Little Richard dies at age 87: Rolling Stone By www.reuters.com Published On :: Sat, 09 May 2020 10:55:28 -0400 Little Richard, the self-proclaimed "architect of rock 'n' roll" who built his ground-breaking sound with a boiling blend of boogie-woogie, rhythm and blues and gospel, died on Saturday at the age of 87, Rolling Stone magazine reported. Full Article peopleNews
die What do studies on new coronavirus mutations tell us? By www.reuters.com Published On :: Thu, 07 May 2020 15:24:19 -0400 A series of studies of the genomes of thousands of samples of the new coronavirus SARS-CoV-2 show that it is mutating and evolving as it adapts to its human hosts. Soraya Ali reports. Full Article
die We're still untangling Ramanujan's mathematics 100 years after he died By www.newscientist.com Published On :: Wed, 22 Apr 2020 18:00:00 +0000 Srinivisa Ramanujan’s ideas seemed to come from a parallel universe and mathematicians are still getting to grips with them today, say Ken Ono and Robert Schneider Full Article
die How many people have really died from covid-19 so far? By www.newscientist.com Published On :: Wed, 29 Apr 2020 16:20:00 +0000 Looking at how many more people are dying than usual gives an idea of the coronavirus pandemic’s true effect – and suggests a far higher death toll in many countries Full Article
die Are you more likely to die of covid-19 if you live in a polluted area? By www.newscientist.com Published On :: Thu, 30 Apr 2020 00:01:58 +0000 A number of studies have found a link between air pollution and increased covid-19 deaths, but it isn't clear why. Both attack the lungs, but it could just be that more people live in polluted areas Full Article
die How to sniff out the good coronavirus studies from the bad By www.newscientist.com Published On :: Wed, 06 May 2020 15:35:41 +0000 With social media, newspapers and politicians all espousing unverified covid-19 findings, use these seven signs to tell if a study should be treated with caution Full Article
die Black people in England and Wales twice as likely to die with covid-19 By www.newscientist.com Published On :: Thu, 07 May 2020 17:30:39 +0000 The latest coronavirus news updated every day including coronavirus cases, the latest news, features and interviews from New Scientist and essential information about the covid-19 pandemic Full Article
die More Studies Link Vaping to Asthma, COPD By www.medicinenet.com Published On :: Tue, 14 Jan 2020 00:00:00 PDT Title: More Studies Link Vaping to Asthma, COPDCategory: Health NewsCreated: 1/14/2020 12:00:00 AMLast Editorial Review: 1/14/2020 12:00:00 AM Full Article
die Trying the Keto Diet? Watch Out for the 'Keto Flu' By www.medicinenet.com Published On :: Fri, 13 Mar 2020 00:00:00 PDT Title: Trying the Keto Diet? Watch Out for the 'Keto Flu'Category: Health NewsCreated: 3/13/2020 12:00:00 AMLast Editorial Review: 3/13/2020 12:00:00 AM Full Article
die Which Diets Help You Keep the Weight From Coming Back? By www.medicinenet.com Published On :: Fri, 3 Apr 2020 00:00:00 PDT Title: Which Diets Help You Keep the Weight From Coming Back?Category: Health NewsCreated: 4/2/2020 12:00:00 AMLast Editorial Review: 4/3/2020 12:00:00 AM Full Article
die Researchers Develop Quick Way to Create Human Antibodies By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Researchers Develop Quick Way to Create Human AntibodiesCategory: Health NewsCreated: 5/1/2008 2:00:00 AMLast Editorial Review: 5/1/2008 12:00:00 AM Full Article
die Some Diet Sodas May Ward Off Kidney Stones By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Some Diet Sodas May Ward Off Kidney StonesCategory: Health NewsCreated: 4/30/2009 2:00:00 AMLast Editorial Review: 4/30/2009 12:00:00 AM Full Article
die Health Tip: Reduce Dietary Sugar By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Health Tip: Reduce Dietary SugarCategory: Health NewsCreated: 4/26/2010 8:10:00 AMLast Editorial Review: 4/26/2010 12:00:00 AM Full Article
die Mediterranean Diet Helps Protect Aging Brain By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Mediterranean Diet Helps Protect Aging BrainCategory: Health NewsCreated: 4/27/2010 8:10:00 AMLast Editorial Review: 4/27/2010 12:00:00 AM Full Article
die New Clues to Low-Calorie Diets and Longer Life By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: New Clues to Low-Calorie Diets and Longer LifeCategory: Health NewsCreated: 4/28/2011 11:01:00 AMLast Editorial Review: 4/28/2011 12:00:00 AM Full Article
die Studies Point to Reasons for Mammograms in 40s By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Studies Point to Reasons for Mammograms in 40sCategory: Health NewsCreated: 5/1/2012 11:00:00 AMLast Editorial Review: 5/1/2012 12:00:00 AM Full Article
die Beastie Boy Adam Yauch Dies, Had Salivary Cancer By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Beastie Boy Adam Yauch Dies, Had Salivary CancerCategory: Health NewsCreated: 5/4/2012 5:32:00 PMLast Editorial Review: 5/4/2012 12:00:00 AM Full Article
die Mediterranean Diet Might Help Stave Off Dementia By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Mediterranean Diet Might Help Stave Off DementiaCategory: Health NewsCreated: 4/29/2013 4:35:00 PMLast Editorial Review: 4/30/2013 12:00:00 AM Full Article
die Health Tip: Help Manage IBS With Diet By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Health Tip: Help Manage IBS With DietCategory: Health NewsCreated: 4/30/2014 7:35:00 AMLast Editorial Review: 4/30/2014 12:00:00 AM Full Article
die High-Fiber Diet May Aid Heart Attack Survivors By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: High-Fiber Diet May Aid Heart Attack SurvivorsCategory: Health NewsCreated: 4/29/2014 7:36:00 PMLast Editorial Review: 4/30/2014 12:00:00 AM Full Article
die Vaccine Against Bird Flu Readied, Just in Case By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Vaccine Against Bird Flu Readied, Just in CaseCategory: Health NewsCreated: 4/30/2014 2:36:00 PMLast Editorial Review: 5/1/2014 12:00:00 AM Full Article
die Doctors Regrow Large Areas of Muscle Lost in Injured Soldiers By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Doctors Regrow Large Areas of Muscle Lost in Injured SoldiersCategory: Health NewsCreated: 4/30/2014 2:36:00 PMLast Editorial Review: 5/1/2014 12:00:00 AM Full Article
die Switch From U.S. to African Diet May Lower Colon Cancer Risk in Blacks By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Switch From U.S. to African Diet May Lower Colon Cancer Risk in BlacksCategory: Health NewsCreated: 4/28/2015 12:00:00 AMLast Editorial Review: 4/29/2015 12:00:00 AM Full Article
die Planning Your Diet Plan By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Planning Your Diet PlanCategory: Health NewsCreated: 5/5/2017 12:00:00 AMLast Editorial Review: 5/5/2017 12:00:00 AM Full Article
die Some Reasons to Work With a Dietitian By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Some Reasons to Work With a DietitianCategory: Health NewsCreated: 5/2/2018 12:00:00 AMLast Editorial Review: 5/2/2018 12:00:00 AM Full Article
die Does Diet Affect a Child's ADHD? By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Does Diet Affect a Child's ADHD?Category: Health NewsCreated: 4/29/2019 12:00:00 AMLast Editorial Review: 4/29/2019 12:00:00 AM Full Article
die As Finals Draw Near, College Kids' Diets Worsen By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: As Finals Draw Near, College Kids' Diets WorsenCategory: Health NewsCreated: 5/3/2019 12:00:00 AMLast Editorial Review: 5/3/2019 12:00:00 AM Full Article
die Diet Sodas May Not Help Kids Cut Calories By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Diet Sodas May Not Help Kids Cut CaloriesCategory: Health NewsCreated: 5/2/2019 12:00:00 AMLast Editorial Review: 5/3/2019 12:00:00 AM Full Article
die Pepcid Ingredient Famotidine Being Tested as COVID-19 Treatment By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Pepcid Ingredient Famotidine Being Tested as COVID-19 TreatmentCategory: Health NewsCreated: 4/27/2020 12:00:00 AMLast Editorial Review: 4/27/2020 12:00:00 AM Full Article
die Antibodies Found in Nearly All People Infected by New Coronavirus: Study By www.medicinenet.com Published On :: Sat, 9 May 2020 00:00:00 PDT Title: Antibodies Found in Nearly All People Infected by New Coronavirus: StudyCategory: Health NewsCreated: 5/8/2020 12:00:00 AMLast Editorial Review: 5/8/2020 12:00:00 AM Full Article
die New Angiotensin Studies in COVID-19 Give More Reassurance By www.webmd.com Published On :: Wed, 06 May 2020 12:51:01 EST A deluge of new data does not suggest harm with ACE inhibitors and angiotensin blockers in COVID-19 rates or outcomes but suggests possible differential effects of the two drug classes. Full Article
die 8 Natural Remedies for Erectile Dysfunction (ED) By www.medicinenet.com Published On :: Fri, 13 Dec 2019 00:00:00 PDT Title: 8 Natural Remedies for Erectile Dysfunction (ED)Category: Doctor's & Expert's views on SymptomsCreated: 5/27/2000 12:00:00 AMLast Editorial Review: 12/13/2019 12:00:00 AM Full Article
die Sinus Headache Pain, Symptoms, Treatments, Remedies, and Cures By www.medicinenet.com Published On :: Mon, 13 Jan 2020 00:00:00 PDT Title: Sinus Headache Pain, Symptoms, Treatments, Remedies, and CuresCategory: Diseases and ConditionsCreated: 1/11/2010 12:00:00 AMLast Editorial Review: 1/13/2020 12:00:00 AM Full Article
die Vitamin E does not prevent Western diet-induced NASH progression and increases metabolic flux dysregulation in mice [Research Articles] By www.jlr.org Published On :: 2020-05-01T00:05:27-07:00 Fatty liver involves ectopic lipid accumulation and dysregulated hepatic oxidative metabolism, which can progress to a state of elevated inflammation and fibrosis referred to as nonalcoholic steatohepatitis (NASH). The factors that control progression from simple steatosis to NASH are not fully known. Here, we tested the hypothesis that dietary vitamin E (VitE) supplementation would prevent NASH progression and associated metabolic alterations induced by a Western diet (WD). Hyperphagic melanocortin-4 receptor-deficient (MC4R–/–) mice were fed chow, chow+VitE, WD, or WD+VitE starting at 8 or 20 weeks of age. All groups exhibited extensive hepatic steatosis by the end of the study (28 weeks of age). WD feeding exacerbated liver disease severity without inducing proportional changes in liver triglycerides. Eight weeks of WD accelerated liver pyruvate cycling, and 20 weeks of WD extensively upregulated liver glucose and oxidative metabolism assessed by 2H/13C flux analysis. VitE supplementation failed to reduce the histological features of NASH. Rather, WD+VitE increased the abundance and saturation of liver ceramides and accelerated metabolic flux dysregulation compared with 8 weeks of WD alone. In summary, VitE did not limit NASH pathogenesis in genetically obese mice, but instead increased some indicators of metabolic dysfunction. Full Article
die Maternal Broadly Neutralizing Antibodies Can Select for Neutralization-Resistant, Infant-Transmitted/Founder HIV Variants By mbio.asm.org Published On :: 2020-03-10T01:30:41-07:00 ABSTRACT Each year, >180,000 infants become infected via mother-to-child transmission (MTCT) of HIV despite the availability of effective maternal antiretroviral treatments, underlining the need for a maternal HIV vaccine. We characterized 224 maternal HIV envelope (Env)-specific IgG monoclonal antibodies (MAbs) from seven nontransmitting and transmitting HIV-infected U.S. and Malawian mothers and examined their neutralization activities against nontransmitted autologous circulating viruses and infant-transmitted founder (infant-T/F) viruses. Only a small subset of maternal viruses, 3 of 72 (4%), were weakly neutralized by maternal linear V3 epitope-specific IgG MAbs, whereas 6 out of 6 (100%) infant-T/F viruses were neutralization resistant to these V3-specific IgG MAbs. We also show that maternal-plasma broadly neutralizing antibody (bNAb) responses targeting the V3 glycan supersite in a transmitting woman may have selected for an N332 V3 glycan neutralization-resistant infant-T/F virus. These data have important implications for bNAb-eliciting vaccines and passively administered bNAbs in the setting of MTCT. IMPORTANCE Efforts to eliminate MTCT of HIV with antiretroviral therapy (ART) have met little success, with >180,000 infant infections each year worldwide. It is therefore likely that additional immunologic strategies that can synergize with ART will be required to eliminate MTCT of HIV. To this end, understanding the role of maternal HIV Env-specific IgG antibodies in the setting of MTCT is crucial. In this study, we found that maternal-plasma broadly neutralizing antibody (bNAb) responses can select for T/F viruses that initiate infection in infants. We propose that clinical trials testing the efficacy of single bNAb specificities should not include HIV-infected pregnant women, as a single bNAb might select for neutralization-resistant infant-T/F viruses. Full Article
die Vaccine-Induced Th1-Type Response Protects against Invasive Group A Streptococcus Infection in the Absence of Opsonizing Antibodies By mbio.asm.org Published On :: 2020-03-10T01:30:41-07:00 ABSTRACT Recent global advocacy efforts have highlighted the importance of development of a vaccine against group A Streptococcus (GAS). Combo5 is a non-M protein-based vaccine that provides protection against GAS skin infection in mice and reduces the severity of pharyngitis in nonhuman primates. However, Combo5 with the addition of aluminum hydroxide (alum) as an adjuvant failed to protect against invasive GAS infection of mice. Here, we show that formulation of Combo5 with adjuvants containing saponin QS21 significantly improves protective efficacy, even though all 7 adjuvants tested generated high antigen-specific IgG antibody titers, including alum. Detailed characterization of Combo5 formulated with SMQ adjuvant, a squalene-in-water emulsion containing a TLR4 agonist and QS21, showed significant differences from the results obtained with alum in IgG subclasses generated following immunization, with an absence of GAS opsonizing antibodies. SMQ, but not alum, generated strong interleukin-6 (IL-6), gamma interferon (IFN-), and tumor necrosis alpha (TNF-α) responses. This work highlights the importance of adjuvant selection for non-M protein-based GAS vaccines to optimize immune responses and protective efficacy. IMPORTANCE Availability of a group A Streptococcus vaccine remains an unmet public health need. Here, we tested different adjuvant formulations to improve the protective efficacy of non-M protein vaccine Combo5 in an invasive disease model. We show that novel adjuvants can dramatically shape the type of immune response developed following immunization with Combo5 and significantly improve protection. In addition, protection afforded by Combo5 is not mediated by opsonizing antibodies, believed to be the main correlate of protection against GAS infections. Overall, this report highlights the importance of adjuvant selection in raising protective immune responses against GAS invasive infection. Adjuvants that can provide a more balanced Th1/Th2-type response may be required to optimize protection of GAS vaccines, particularly those based on non-M protein antigens. Full Article
die Neutralizing Monoclonal Antibodies against the Gn and the Gc of the Andes Virus Glycoprotein Spike Complex Protect from Virus Challenge in a Preclinical Hamster Model By mbio.asm.org Published On :: 2020-03-24T01:31:00-07:00 ABSTRACT Hantaviruses are the etiological agent of hemorrhagic fever with renal syndrome (HFRS) and hantavirus cardiopulmonary syndrome (HCPS). The latter is associated with case fatality rates ranging from 30% to 50%. HCPS cases are rare, with approximately 300 recorded annually in the Americas. Recently, an HCPS outbreak of unprecedented size has been occurring in and around Epuyén, in the southwestern Argentinian state of Chubut. Since November of 2018, at least 29 cases have been laboratory confirmed, and human-to-human transmission is suspected. Despite posing a significant threat to public health, no treatment or vaccine is available for hantaviral disease. Here, we describe an effort to identify, characterize, and develop neutralizing and protective antibodies against the glycoprotein complex (Gn and Gc) of Andes virus (ANDV), the causative agent of the Epuyén outbreak. Using murine hybridoma technology, we generated 19 distinct monoclonal antibodies (MAbs) against ANDV GnGc. When tested for neutralization against a recombinant vesicular stomatitis virus expressing the Andes glycoprotein (GP) (VSV-ANDV), 12 MAbs showed potent neutralization and 8 showed activity in an antibody-dependent cellular cytotoxicity reporter assay. Escape mutant analysis revealed that neutralizing MAbs targeted both the Gn and the Gc. Four MAbs that bound different epitopes were selected for preclinical studies and were found to be 100% protective against lethality in a Syrian hamster model of ANDV infection. These data suggest the existence of a wide array of neutralizing antibody epitopes on hantavirus GnGc with unique properties and mechanisms of action. IMPORTANCE Infections with New World hantaviruses are associated with high case fatality rates, and no specific vaccine or treatment options exist. Furthermore, the biology of the hantaviral GnGc complex, its antigenicity, and its fusion machinery are poorly understood. Protective monoclonal antibodies against GnGc have the potential to be developed into therapeutics against hantaviral disease and are also great tools to elucidate the biology of the glycoprotein complex. Full Article
die A Chimeric Japanese Encephalitis Vaccine Protects against Lethal Yellow Fever Virus Infection without Inducing Neutralizing Antibodies By mbio.asm.org Published On :: 2020-04-07T01:31:16-07:00 ABSTRACT Recent outbreaks of yellow fever virus (YFV) in West Africa and Brazil resulted in rapid depletion of global vaccine emergency stockpiles and raised concerns about being unprepared against future YFV epidemics. Here we report that a live attenuated virus similar to the Japanese encephalitis virus (JEV) vaccine JE-CVax/Imojev that consists of YFV-17D vaccine from which the structural (prM/E) genes have been replaced with those of the JEV SA14-14-2 vaccine strain confers full protection in mice against lethal YFV challenge. In contrast to the YFV-17D-mediated protection against YFV, this protection is not mediated by neutralizing antibodies but correlates with YFV-specific nonneutralizing antibodies and T cell responses against cell-associated YFV NS1 and other YFV nonstructural (NS) proteins. Our findings reveal the potential of YFV NS proteins to mediate protection and demonstrate that chimeric flavivirus vaccines, such as Imojev, could confer protection against two flaviviruses. This dual protection may have implications for the possible off-label use of JE-CVax in case of emergency and vaccine shortage during YFV outbreaks. In addition, populations in Asia that have been vaccinated with Imojev may already be protected against YFV should outbreaks ever occur on that continent, as several countries/regions in the Asia-Pacific are vulnerable to international spread of the YFV. IMPORTANCE Efficient and safe vaccines against yellow fever (e.g., YFV-17D) that provide long-lasting protection by rapidly inducing neutralizing antibody responses exist. However, the vaccine supply cannot cope with an increasing demand posed by urban outbreaks in recent years. Here we report that JE-CVax/Imojev, a YFV-17D-based chimeric Japanese encephalitis vaccine, also efficiently protects against YFV infection in mice. In case of shortage of the YFV vaccine during yellow fever outbreaks, (off-label) use of JE-CVax/Imojev may be considered. Moreover, wider use of JE-CVax/Imojev in Asia may lower the risk of the much-feared YFV spillover to the continent. More generally, chimeric vaccines that combine surface antigens and replication machineries of two distinct flaviviruses may be considered dual vaccines for the latter pathogen without induction of surface-specific antibodies. Following this rationale, novel flavivirus vaccines that do not hold a risk for antibody-dependent enhancement (ADE) of infection (inherent to current dengue vaccines and dengue vaccine candidates) could be designed. Full Article
die Modulation of the Gut Microbiota during High-Dose Glycerol Monolaurate-Mediated Amelioration of Obesity in Mice Fed a High-Fat Diet By mbio.asm.org Published On :: 2020-04-07T01:31:16-07:00 ABSTRACT Obesity and associated metabolic disorders are worldwide public health issues. The gut microbiota plays a key role in the pathophysiology of diet-induced obesity. Glycerol monolaurate (GML) is a widely consumed food emulsifier with antibacterial properties. Here, we explore the anti-obesity effect of GML (1,600 mg/kg of body weight) in high-fat diet (HFD)-fed mice. HFD-fed mice were treated with 1,600 mg/kg GML. Integrated microbiome, metabolome, and transcriptome analyses were used to systematically investigate the metabolic effects of GML, and antibiotic treatment was used to assess the effects of GML on the gut microbiota. Our data indicated that GML significantly reduced body weight and visceral fat deposition, improved hyperlipidemia and hepatic lipid metabolism, and ameliorated glucose homeostasis and inflammation in HFD-fed mice. Importantly, GML modulated HFD-induced gut microbiota dysbiosis and selectively increased the abundance of Bifidobacterium pseudolongum. Antibiotic treatment abolished all the GML-mediated metabolic improvements. A multiomics (microbiome, metabolome, and transcriptome) association study showed that GML significantly modulated glycerophospholipid metabolism, and the abundance of Bifidobacterium pseudolongum strongly correlated with the metabolites and genes that participated in glycerophospholipid metabolism. Our results indicated that GML may be provided for obesity prevention by targeting the gut microbiota and regulating glycerophospholipid metabolism. Full Article
die A Simple, Cost-Effective, and Robust Method for rRNA Depletion in RNA-Sequencing Studies By mbio.asm.org Published On :: 2020-04-21T01:31:26-07:00 ABSTRACT The profiling of gene expression by RNA sequencing (RNA-seq) has enabled powerful studies of global transcriptional patterns in all organisms, including bacteria. Because the vast majority of RNA in bacteria is rRNA, it is standard practice to deplete the rRNA from a total RNA sample such that the reads in an RNA-seq experiment derive predominantly from mRNA. One of the most commonly used commercial kits for rRNA depletion, the Ribo-Zero kit from Illumina, was recently discontinued abruptly and for an extended period of time. Here, we report the development of a simple, cost-effective, and robust method for depleting rRNA that can be easily implemented by any lab or facility. We first developed an algorithm for designing biotinylated oligonucleotides that will hybridize tightly and specifically to the 23S, 16S, and 5S rRNAs from any species of interest. Precipitation of these oligonucleotides bound to rRNA by magnetic streptavidin-coated beads then depletes rRNA from a complex, total RNA sample such that ~75 to 80% of reads in a typical RNA-seq experiment derive from mRNA. Importantly, we demonstrate a high correlation of RNA abundance or fold change measurements in RNA-seq experiments between our method and the Ribo-Zero kit. Complete details on the methodology are provided, including open-source software for designing oligonucleotides optimized for any bacterial species or community of interest. IMPORTANCE The ability to examine global patterns of gene expression in microbes through RNA sequencing has fundamentally transformed microbiology. However, RNA-seq depends critically on the removal of rRNA from total RNA samples. Otherwise, rRNA would comprise upward of 90% of the reads in a typical RNA-seq experiment, limiting the reads coming from mRNA or requiring high total read depth. A commonly used kit for rRNA subtraction from Illumina was recently unavailable for an extended period of time, disrupting routine rRNA depletion. Here, we report the development of a "do-it-yourself" kit for rapid, cost-effective, and robust depletion of rRNA from total RNA. We present an algorithm for designing biotinylated oligonucleotides that will hybridize to the rRNAs from a target set of species. We then demonstrate that the designed oligonucleotides enable sufficient rRNA depletion to produce RNA-seq data with 75 to 80% of reads coming from mRNA. The methodology presented should enable RNA-seq studies on any species or metagenomic sample of interest. Full Article
die Levodopa-induced dyskinesia in dementia with Lewy bodies and Parkinson disease with dementia By cp.neurology.org Published On :: 2020-04-06T12:45:20-07:00 Objective To investigate the frequency of levodopa-induced dyskinesia in dementia with Lewy bodies (DLBs) and Parkinson disease with dementia (PDD) and compare these frequencies with patients with incident Parkinson disease (PD) through a population-based cohort study. Methods We identified all patients with DLB, PDD, and PD without dementia in a 1991–2010 population-based parkinsonism-incident cohort, in Olmsted County, Minnesota. We abstracted information about levodopa-induced dyskinesia. We compared patients with DLB and PDD with dyskinesia with patients with PD from the same cohort. Results Levodopa use and dyskinesia data were available for 141/143 (98.6%) patients with a diagnosis of either DLB or PDD; 87 (61.7%), treated with levodopa. Dyskinesia was documented in 12.6% (8 DLB and 3 PDD) of levodopa-treated patients. Among these patients, median parkinsonism diagnosis age was 74 years (range: 64–80 years); 63.6%, male. The median interval from levodopa initiation to dyskinesia onset was 2 years (range: 3 months–4 years); the median daily levodopa dosage was 600 mg (range: 50–1,600 mg). Dyskinesia severity led to levodopa adjustments in 5 patients, and all improved. Patients with dyskinesia were diagnosed with parkinsonism at a significantly younger age compared with patients without dyskinesia (p < 0.001). Levodopa dosage was unrelated to increased risk of dyskinesias among DLB and PDD. In contrast, 30.1% of levodopa-treated patients with PD developed dyskinesia. In age-, sex-, and levodopa dosage–adjusted models, Patients with DLB and PDD each had lower odds of developing dyskinesia than patients with PD (odds ratio = 0.42, 95% CI 0.21–0.88; p = 0.02). Conclusions The dyskinesia risk for levodopa-treated patients with DLB or PDD was substantially less than for levodopa-treated patients with PD. Full Article
die Ahmed A, Fend PI, Gaensbauer JT, Reves RR, Khurana R, Salcedo K, Punnoose R, Katz DJ, for the TUBERCULOSIS EPIDEMIOLOGIC STUDIES CONSORTIUM. Interferon-{gamma} Release Assays in Children <15 Years of Age. Pediatrics. 2020:145(1):e20191930 By pediatrics.aappublications.org Published On :: 2020-05-01T01:00:46-07:00 Full Article
die Phosphoflow Protocol for Signaling Studies in Human and Murine B Cell Subpopulations [NOVEL IMMUNOLOGICAL METHODS] By www.jimmunol.org Published On :: 2020-05-04T13:00:28-07:00 Key Points Method for highly sensitive detection of phosphorylation in B cell subpopulations. B cell subpopulations show different phosphorylation levels upon BCR stimulation. Full Article
die Correction for Dietz et al., "2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission" By msystems.asm.org Published On :: 2020-05-05T07:30:12-07:00 Full Article